RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 SH3RF1Q7Z6J0 888 aa30.17■■■□□ 2.42
SH3GL3-202ENST00000427482 GRAMD1CQ8IYS0 662 aa30.17■■■□□ 2.42
SH3GL3-202ENST00000427482 AOPEPQ8N6M6 819 aa30.17■■■□□ 2.42
SH3GL3-202ENST00000427482 AMNQ9BXJ7 453 aa30.17■■■□□ 2.42
SH3GL3-202ENST00000427482 VCPKMTQ9H867 229 aa30.17■■■□□ 2.42
SH3GL3-202ENST00000427482 SARSP49591 514 aaKnown RBP30.17■■■□□ 2.42
SH3GL3-202ENST00000427482 ARHGAP27Q6ZUM4 889 aa30.17■■■□□ 2.42
SH3GL3-202ENST00000427482 EDIL3O43854 480 aa30.16■■■□□ 2.42
SH3GL3-202ENST00000427482 LMNB1P20700 586 aa30.16■■■□□ 2.42
SH3GL3-202ENST00000427482 STAT2P52630 851 aa30.16■■■□□ 2.42
SH3GL3-202ENST00000427482 ISM2Q6H9L7 571 aa30.16■■■□□ 2.42
SH3GL3-202ENST00000427482 CCDC39Q9UFE4 941 aa30.16■■■□□ 2.42
SH3GL3-202ENST00000427482 PRR12Q9ULL5 1215 aa30.16■■■□□ 2.42
SH3GL3-202ENST00000427482 TXLNAP40222 546 aa30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 FBXO11Q86XK2 927 aa30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 IQUBQ8NA54 791 aa30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 SMARCE1Q969G3 411 aa30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 PAGE5Q96GU1 130 aa30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 FHDC1Q9C0D6 1143 aaPredicted RBP30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 H7C1D1 291 aa30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 SNAP25P60880 206 aa30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 FAM83BQ5T0W9 1011 aa30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 SPATA20Q8TB22 786 aa30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 MAN1B1Q9UKM7 699 aa30.15■■■□□ 2.42
SH3GL3-202ENST00000427482 DEFB129Q9H1M3 183 aa30.14■■■□□ 2.42
SH3GL3-202ENST00000427482 DOCK1Q14185 1865 aa30.14■■■□□ 2.42
SH3GL3-202ENST00000427482 SARM1Q6SZW1 724 aa30.13■■■□□ 2.41
SH3GL3-202ENST00000427482 POTEDQ86YR6 584 aa30.13■■■□□ 2.41
SH3GL3-202ENST00000427482 GLIS2Q9BZE0 524 aaPredicted RBP30.13■■■□□ 2.41
SH3GL3-202ENST00000427482 PDXDC2PQ6P474 469 aa30.12■■■□□ 2.41
SH3GL3-202ENST00000427482 GPC2Q8N158 579 aa30.12■■■□□ 2.41
SH3GL3-202ENST00000427482 TRIML1Q8N9V2 468 aa30.12■■■□□ 2.41
SH3GL3-202ENST00000427482 AK8Q96MA6 479 aa30.12■■■□□ 2.41
SH3GL3-202ENST00000427482 CCSER1Q9C0I3 900 aa30.12■■■□□ 2.41
SH3GL3-202ENST00000427482 GINM1Q9NU53 330 aa30.12■■■□□ 2.41
SH3GL3-202ENST00000427482 GPRC5DQ9NZD1 345 aa30.12■■■□□ 2.41
SH3GL3-202ENST00000427482 SMCHD1A6NHR9 2005 aa30.12■■■□□ 2.41
SH3GL3-202ENST00000427482 FAM43AQ8N2R8 423 aa30.12■■■□□ 2.41
SH3GL3-202ENST00000427482 PLA2G6O60733 806 aa30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 SMC2O95347 1197 aa30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 TDP2O95551 362 aa30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 PTMAP06454 111 aaKnown RBP30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 BMP6P22004 513 aa30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 CDC25AP30304 524 aa30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 AFMP43652 599 aa30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 MORC3Q14149 939 aa30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 PPP4R3AQ6IN85 833 aa30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 PLA2G4DQ86XP0 818 aa30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 MTMR9Q96QG7 549 aa30.11■■■□□ 2.41
SH3GL3-202ENST00000427482 USP17L15C9J2P7 530 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 USP17L13C9JLJ4 530 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 USP17L11C9JVI0 530 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 USP17L18D6R9N7 530 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 USP17L22D6RA61 530 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 USP17L17D6RBQ6 530 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 USP17L19D6RCP7 530 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 USP17L20D6RJB6 530 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 USP17L24Q0WX57 530 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 ZYXQ15942 572 aaKnown RBP30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 USP17L6PQ6QN14 398 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 CCDC84Q86UT8 332 aaPredicted RBP30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 CHURC1Q8WUH1 139 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 DISC1Q9NRI5 854 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 PP2D1A8MPX8 630 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 ESPNB1AK53 854 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 MEIS2O14770 477 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 SLC37A4O43826 429 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 ZNF75DP51815 510 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 DPYDQ12882 1025 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 KARSQ15046 597 aaKnown RBP30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 USH1GQ495M9 461 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 APOBEC3FQ8IUX4 373 aaKnown RBP30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 TRPM4Q8TD43 1214 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 TRIM5Q9C035 493 aa30.1■■■□□ 2.41
SH3GL3-202ENST00000427482 SMTNL1A8MU46 457 aa30.09■■■□□ 2.41
SH3GL3-202ENST00000427482 IKBKBO14920 756 aa30.09■■■□□ 2.41
SH3GL3-202ENST00000427482 CTNND1O60716 968 aaKnown RBP30.09■■■□□ 2.41
SH3GL3-202ENST00000427482 UBA7P41226 1012 aa30.09■■■□□ 2.41
SH3GL3-202ENST00000427482 AP3B2Q13367 1082 aa30.09■■■□□ 2.41
SH3GL3-202ENST00000427482 CALCRLQ16602 461 aa30.09■■■□□ 2.41
SH3GL3-202ENST00000427482 MCTP2Q6DN12 878 aa30.09■■■□□ 2.41
SH3GL3-202ENST00000427482 ZNF341Q9BYN7 854 aa30.09■■■□□ 2.41
SH3GL3-202ENST00000427482 NCAPHQ15003 741 aa30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 NBPF12Q5TAG4 269 aaPredicted RBP30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 ANGEL2Q5VTE6 544 aaKnown RBP30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 FAM160B2Q86V87 743 aa30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 GCFC2P16383 781 aaKnown RBP30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 STAT6P42226 847 aa30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 TRAF1Q13077 416 aa30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 ZSCAN30Q86W11 494 aa30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 NAP1L4Q99733 375 aaKnown RBP30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 ANO3Q9BYT9 981 aa30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 RANBP17Q9H2T7 1088 aaKnown RBP30.08■■■□□ 2.41
SH3GL3-202ENST00000427482 DCAF15Q66K64 600 aa30.07■■■□□ 2.4
SH3GL3-202ENST00000427482 IGSF22Q8N9C0 903 aa30.07■■■□□ 2.4
SH3GL3-202ENST00000427482 MLKLQ8NB16 471 aa30.07■■■□□ 2.4
SH3GL3-202ENST00000427482 FEZ1Q99689 392 aa30.07■■■□□ 2.4
SH3GL3-202ENST00000427482 FEM1BQ9UK73 627 aa30.07■■■□□ 2.4
SH3GL3-202ENST00000427482 TECP42680 631 aa30.06■■■□□ 2.4
SH3GL3-202ENST00000427482 FXR2P51116 673 aaKnown RBP eCLIP30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms