RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 FBXO40Q9UH90 709 aa16.2■□□□□ 0.18
VEGFB-202ENST00000426086 FEM1BQ9UK73 627 aa16.2■□□□□ 0.18
VEGFB-202ENST00000426086 CTDP1Q9Y5B0 961 aaPredicted RBP16.2■□□□□ 0.18
VEGFB-202ENST00000426086 LCTP09848 1927 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 RAB11FIP3O75154 756 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 OAZ1P54368 228 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 SNAP25P60880 206 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 TAPT1Q6NXT6 567 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 RASGRP2Q7LDG7 609 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 IL27Q8NEV9 243 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 MTIF3Q9H2K0 278 aaKnown RBP16.19■□□□□ 0.18
VEGFB-202ENST00000426086 EPHX3Q9H6B9 360 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 CERS4Q9HA82 394 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 RNF146Q9NTX7 359 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 PCDHA11Q9Y5I1 949 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 SLC4A7Q9Y6M7 1214 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 SCN5AQ14524 2016 aa16.19■□□□□ 0.18
VEGFB-202ENST00000426086 TMEM232C9JQI7 657 aa16.18■□□□□ 0.18
VEGFB-202ENST00000426086 SMARCA5O60264 1052 aaPredicted RBP16.18■□□□□ 0.18
VEGFB-202ENST00000426086 CYP2C9P11712 490 aa16.18■□□□□ 0.18
VEGFB-202ENST00000426086 MUM1L1Q5H9M0 696 aa16.18■□□□□ 0.18
VEGFB-202ENST00000426086 SLFN13Q68D06 897 aa16.18■□□□□ 0.18
VEGFB-202ENST00000426086 FBXO16Q8IX29 292 aaPredicted RBP16.18■□□□□ 0.18
VEGFB-202ENST00000426086 GMCL1P1Q8NEA9 526 aa16.18■□□□□ 0.18
VEGFB-202ENST00000426086 PPP1R13LQ8WUF5 828 aa16.18■□□□□ 0.18
VEGFB-202ENST00000426086 ACAD9Q9H845 621 aa16.18■□□□□ 0.18
VEGFB-202ENST00000426086 ZBTB40Q9NUA8 1239 aa16.18■□□□□ 0.18
VEGFB-202ENST00000426086 MTCH2Q9Y6C9 303 aa16.18■□□□□ 0.18
VEGFB-202ENST00000426086 CHD9Q3L8U1 2897 aa16.17■□□□□ 0.18
VEGFB-202ENST00000426086 ZBBXA8MT70 800 aa16.17■□□□□ 0.18
VEGFB-202ENST00000426086 CABYRO75952 493 aa16.17■□□□□ 0.18
VEGFB-202ENST00000426086 CA3P07451 260 aa16.17■□□□□ 0.18
VEGFB-202ENST00000426086 BMP3P12645 472 aa16.17■□□□□ 0.18
VEGFB-202ENST00000426086 ATP2A2P16615 1042 aaKnown RBP16.17■□□□□ 0.18
VEGFB-202ENST00000426086 SPRED2Q7Z698 418 aa16.17■□□□□ 0.18
VEGFB-202ENST00000426086 KHSRPQ92945 711 aaKnown RBP eCLIP16.17■□□□□ 0.18
VEGFB-202ENST00000426086 TRMT13Q9NUP7 481 aaKnown RBP16.17■□□□□ 0.18
VEGFB-202ENST00000426086 COG6Q9Y2V7 657 aa16.17■□□□□ 0.18
VEGFB-202ENST00000426086 M0R2C6 588 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 ERC2O15083 957 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 HMMRO75330 724 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 TTLL1O95922 423 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 ALAS1P13196 640 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
VEGFB-202ENST00000426086 SKIV2LQ15477 1246 aaKnown RBP16.16■□□□□ 0.18
VEGFB-202ENST00000426086 ZSCAN25Q6NSZ9 544 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 GIMAP6Q6P9H5 292 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 DEFB128Q7Z7B8 93 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 ZNF444Q8N0Y2 327 aaPredicted RBP16.16■□□□□ 0.18
VEGFB-202ENST00000426086 TRERF1Q96PN7 1200 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 LRFN3Q9BTN0 628 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 AP5M1Q9H0R1 490 aa16.16■□□□□ 0.18
VEGFB-202ENST00000426086 ALDH8A1Q9H2A2 487 aaPredicted RBP16.16■□□□□ 0.18
VEGFB-202ENST00000426086 ASB14A6NK59 587 aa16.15■□□□□ 0.18
VEGFB-202ENST00000426086 HNRNPUQ00839 825 aaKnown RBP eCLIP16.15■□□□□ 0.18
VEGFB-202ENST00000426086 TSHZ3Q63HK5 1081 aa16.15■□□□□ 0.18
VEGFB-202ENST00000426086 RPUSD2Q8IZ73 545 aaKnown RBP16.15■□□□□ 0.18
VEGFB-202ENST00000426086 APPBP2Q92624 585 aa16.15■□□□□ 0.18
VEGFB-202ENST00000426086 PRRC2BQ5JSZ5 2229 aaKnown RBP16.15■□□□□ 0.18
VEGFB-202ENST00000426086 PLIN4Q96Q06 1357 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 GPAA1O43292 621 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 POU3F3P20264 500 aaPredicted RBP16.14■□□□□ 0.17
VEGFB-202ENST00000426086 MCCP23508 829 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 STAT2P52630 851 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 IQSEC1Q6DN90 963 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 KCTD1Q719H9 257 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 KBTBD3Q8NAB2 608 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 C1QTNF1Q9BXJ1 281 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 TSPYL2Q9H2G4 693 aaPredicted RBP16.14■□□□□ 0.17
VEGFB-202ENST00000426086 CYP39A1Q9NYL5 469 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 ISY1Q9ULR0 285 aaKnown RBP16.14■□□□□ 0.17
VEGFB-202ENST00000426086 CHD7Q9P2D1 2997 aa16.14■□□□□ 0.17
VEGFB-202ENST00000426086 TLL1O43897 1013 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 TDO2P48775 406 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 TAP1Q03518 808 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 KIAA1211Q6ZU35 1233 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 MORC4Q8TE76 937 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 STAG1Q8WVM7 1258 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 SEC62Q99442 399 aaKnown RBP16.13■□□□□ 0.17
VEGFB-202ENST00000426086 C11orf16Q9NQ32 467 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 INCENPQ9NQS7 918 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 SYNPO2Q9UMS6 1093 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 Q9Y3F1 56 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 TNKSO95271 1327 aa16.13■□□□□ 0.17
VEGFB-202ENST00000426086 PTPRSQ13332 1948 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 RNF113AO15541 343 aaKnown RBP16.12■□□□□ 0.17
VEGFB-202ENST00000426086 ZEB2O60315 1214 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 FDX1P10109 184 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 PURAQ00577 322 aaKnown RBP16.12■□□□□ 0.17
VEGFB-202ENST00000426086 TFAP4Q01664 338 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 NSMFQ6X4W1 530 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 FAM160B2Q86V87 743 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 IFNL3Q8IZI9 196 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 GMCL1Q96IK5 515 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 LRRCC1Q9C099 1032 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 PRR12Q9ULL5 1215 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 REV3LO60673 3130 aa16.12■□□□□ 0.17
VEGFB-202ENST00000426086 NMT2O60551 498 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms