RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 PAGE5Q96GU1 130 aa30.06■■■□□ 2.4
LDB1-202ENST00000425280 ASNSP08243 561 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 CCDC34Q96HJ3 373 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 PYM1Q9BRP8 204 aaKnown RBP30.05■■■□□ 2.4
LDB1-202ENST00000425280 AMNQ9BXJ7 453 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 GLT8D2Q9H1C3 349 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 MAN1B1Q9UKM7 699 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 CDC25AP30304 524 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 IQUBQ8NA54 791 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 SMARCE1Q969G3 411 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 VCPKMTQ9H867 229 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 PRR12Q9ULL5 1215 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 ATAD5Q96QE3 1844 aa30.05■■■□□ 2.4
LDB1-202ENST00000425280 FAM83BQ5T0W9 1011 aa30.04■■■□□ 2.4
LDB1-202ENST00000425280 FBXO11Q86XK2 927 aa30.04■■■□□ 2.4
LDB1-202ENST00000425280 FAM43AQ8N2R8 423 aa30.04■■■□□ 2.4
LDB1-202ENST00000425280 SPATA20Q8TB22 786 aa30.04■■■□□ 2.4
LDB1-202ENST00000425280 ESPNB1AK53 854 aa30.03■■■□□ 2.4
LDB1-202ENST00000425280 PTMAP06454 111 aaKnown RBP30.03■■■□□ 2.4
LDB1-202ENST00000425280 BMP6P22004 513 aa30.03■■■□□ 2.4
LDB1-202ENST00000425280 TXLNAP40222 546 aa30.03■■■□□ 2.4
LDB1-202ENST00000425280 STAT2P52630 851 aa30.03■■■□□ 2.4
LDB1-202ENST00000425280 GLIS2Q9BZE0 524 aaPredicted RBP30.03■■■□□ 2.4
LDB1-202ENST00000425280 SH2D4AQ9H788 454 aa30.03■■■□□ 2.4
LDB1-202ENST00000425280 AFMP43652 599 aa30.03■■■□□ 2.4
LDB1-202ENST00000425280 CCDC84Q86UT8 332 aaPredicted RBP30.03■■■□□ 2.4
LDB1-202ENST00000425280 POTEDQ86YR6 584 aa30.03■■■□□ 2.4
LDB1-202ENST00000425280 DEFB129Q9H1M3 183 aa30.03■■■□□ 2.4
LDB1-202ENST00000425280 DICER1Q9UPY3 1922 aaKnown RBP30.03■■■□□ 2.4
LDB1-202ENST00000425280 PP2D1A8MPX8 630 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 H7C1D1 291 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 LMNB1P20700 586 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 PDXDC2PQ6P474 469 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 PLA2G4DQ86XP0 818 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 TRIM5Q9C035 493 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 FHDC1Q9C0D6 1143 aaPredicted RBP30.02■■■□□ 2.4
LDB1-202ENST00000425280 USP17L15C9J2P7 530 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 USP17L13C9JLJ4 530 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 USP17L11C9JVI0 530 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 USP17L18D6R9N7 530 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 USP17L22D6RA61 530 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 USP17L17D6RBQ6 530 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 USP17L19D6RCP7 530 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 USP17L20D6RJB6 530 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 ZNF75DP51815 510 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 USP17L24Q0WX57 530 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 ZYXQ15942 572 aaKnown RBP30.02■■■□□ 2.4
LDB1-202ENST00000425280 USP17L6PQ6QN14 398 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 SARM1Q6SZW1 724 aa30.02■■■□□ 2.4
LDB1-202ENST00000425280 TDP2O95551 362 aa30.01■■■□□ 2.39
LDB1-202ENST00000425280 MORC3Q14149 939 aa30.01■■■□□ 2.39
LDB1-202ENST00000425280 SMC2O95347 1197 aa30■■■□□ 2.39
LDB1-202ENST00000425280 KARSQ15046 597 aaKnown RBP30■■■□□ 2.39
LDB1-202ENST00000425280 USH1GQ495M9 461 aa30■■■□□ 2.39
LDB1-202ENST00000425280 MTMR9Q96QG7 549 aa30■■■□□ 2.39
LDB1-202ENST00000425280 CCSER1Q9C0I3 900 aa30■■■□□ 2.39
LDB1-202ENST00000425280 RRAGDQ9NQL2 400 aaPredicted RBP30■■■□□ 2.39
LDB1-202ENST00000425280 MYH7BA7E2Y1 1941 aa30■■■□□ 2.39
LDB1-202ENST00000425280 SLC37A4O43826 429 aa30■■■□□ 2.39
LDB1-202ENST00000425280 DPYDQ12882 1025 aa30■■■□□ 2.39
LDB1-202ENST00000425280 NCAPHQ15003 741 aa30■■■□□ 2.39
LDB1-202ENST00000425280 TRIML1Q8N9V2 468 aa30■■■□□ 2.39
LDB1-202ENST00000425280 AK8Q96MA6 479 aa30■■■□□ 2.39
LDB1-202ENST00000425280 ZSCAN30Q86W11 494 aa29.99■■■□□ 2.39
LDB1-202ENST00000425280 DISC1Q9NRI5 854 aa29.99■■■□□ 2.39
LDB1-202ENST00000425280 GPRC5DQ9NZD1 345 aa29.99■■■□□ 2.39
LDB1-202ENST00000425280 MEIS2O14770 477 aa29.99■■■□□ 2.39
LDB1-202ENST00000425280 CASP1P29466 404 aa29.99■■■□□ 2.39
LDB1-202ENST00000425280 UBA7P41226 1012 aa29.99■■■□□ 2.39
LDB1-202ENST00000425280 CALCRLQ16602 461 aa29.99■■■□□ 2.39
LDB1-202ENST00000425280 PPP4R3AQ6IN85 833 aa29.99■■■□□ 2.39
LDB1-202ENST00000425280 TRPM4Q8TD43 1214 aa29.99■■■□□ 2.39
LDB1-202ENST00000425280 SMTNL1A8MU46 457 aa29.98■■■□□ 2.39
LDB1-202ENST00000425280 IKBKBO14920 756 aa29.98■■■□□ 2.39
LDB1-202ENST00000425280 NBPF12Q5TAG4 269 aaPredicted RBP29.98■■■□□ 2.39
LDB1-202ENST00000425280 GPC2Q8N158 579 aa29.98■■■□□ 2.39
LDB1-202ENST00000425280 ZNF341Q9BYN7 854 aa29.98■■■□□ 2.39
LDB1-202ENST00000425280 SBF1O95248 1867 aa29.98■■■□□ 2.39
LDB1-202ENST00000425280 TAL1P17542 331 aaPredicted RBP29.97■■■□□ 2.39
LDB1-202ENST00000425280 CHURC1Q8WUH1 139 aa29.97■■■□□ 2.39
LDB1-202ENST00000425280 STAMQ92783 540 aa29.97■■■□□ 2.39
LDB1-202ENST00000425280 MTRQ99707 1265 aa29.97■■■□□ 2.39
LDB1-202ENST00000425280 PLA2G6O60733 806 aa29.97■■■□□ 2.39
LDB1-202ENST00000425280 STAT6P42226 847 aa29.97■■■□□ 2.39
LDB1-202ENST00000425280 ANGEL2Q5VTE6 544 aaKnown RBP29.97■■■□□ 2.39
LDB1-202ENST00000425280 CTNND1O60716 968 aaKnown RBP29.96■■■□□ 2.39
LDB1-202ENST00000425280 TECP42680 631 aa29.96■■■□□ 2.39
LDB1-202ENST00000425280 ANO3Q9BYT9 981 aa29.96■■■□□ 2.39
LDB1-202ENST00000425280 GINM1Q9NU53 330 aa29.96■■■□□ 2.39
LDB1-202ENST00000425280 TXKP42681 527 aa29.95■■■□□ 2.39
LDB1-202ENST00000425280 AP3B2Q13367 1082 aa29.95■■■□□ 2.39
LDB1-202ENST00000425280 NAALADL2Q58DX5 795 aa29.95■■■□□ 2.39
LDB1-202ENST00000425280 IGSF22Q8N9C0 903 aa29.95■■■□□ 2.39
LDB1-202ENST00000425280 MLKLQ8NB16 471 aa29.95■■■□□ 2.39
LDB1-202ENST00000425280 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.95■■■□□ 2.39
LDB1-202ENST00000425280 OPLAHO14841 1288 aa29.95■■■□□ 2.38
LDB1-202ENST00000425280 RRAGBQ5VZM2 374 aa29.95■■■□□ 2.38
LDB1-202ENST00000425280 FAM160B2Q86V87 743 aa29.95■■■□□ 2.38
LDB1-202ENST00000425280 APOBEC3FQ8IUX4 373 aaKnown RBP29.95■■■□□ 2.38
LDB1-202ENST00000425280 SPC24Q8NBT2 197 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms