RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 A0A1W2PQ27 194 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 A0A1W2PQ64 194 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 A0A1W2PQD8 194 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 VCAM1P19320 739 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 HMGCS2P54868 508 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 PPP1R18Q6NYC8 613 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 FBXO11Q86XK2 927 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 ZNF526Q8TF50 670 aaPredicted RBP17.11■□□□□ 0.33
CALD1-206ENST00000424922 AMNQ9BXJ7 453 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 AFG3L2Q9Y4W6 797 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 PCDHB6Q9Y5E3 794 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 TRAF5O00463 557 aa17.1■□□□□ 0.33
CALD1-206ENST00000424922 SPTLC2O15270 562 aa17.1■□□□□ 0.33
CALD1-206ENST00000424922 ME1P48163 572 aa17.1■□□□□ 0.33
CALD1-206ENST00000424922 ADCY7P51828 1080 aa17.1■□□□□ 0.33
CALD1-206ENST00000424922 SLC39A14Q15043 492 aa17.1■□□□□ 0.33
CALD1-206ENST00000424922 USH1GQ495M9 461 aa17.1■□□□□ 0.33
CALD1-206ENST00000424922 CCDC73Q6ZRK6 1079 aa17.1■□□□□ 0.33
CALD1-206ENST00000424922 TANGO6Q9C0B7 1094 aa17.1■□□□□ 0.33
CALD1-206ENST00000424922 MYH7BA7E2Y1 1941 aa17.1■□□□□ 0.33
CALD1-206ENST00000424922 COL11A1P12107 1806 aaPredicted RBP17.09■□□□□ 0.33
CALD1-206ENST00000424922 CCDC194A0A1B0GVG4 234 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 C19orf81C9J6K1 198 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 TPM3P06753 285 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 FAM160A1Q05DH4 1040 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.33
CALD1-206ENST00000424922 PTPAQ15257 358 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 CKAP2LQ8IYA6 745 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 ENGASEQ8NFI3 743 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 KCNG4Q8TDN1 519 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 CLMNQ96JQ2 1002 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 NMRK2Q9NPI5 230 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 BIN2Q9UBW5 565 aaPredicted RBP17.09■□□□□ 0.33
CALD1-206ENST00000424922 RLFQ13129 1914 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 ADALQ6DHV7 355 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 CCDC174Q6PII3 467 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 ANKRD13AQ8IZ07 590 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 REXO1Q8N1G1 1221 aaKnown RBP17.09■□□□□ 0.33
CALD1-206ENST00000424922 RPAP3Q9H6T3 665 aaPredicted RBP17.09■□□□□ 0.33
CALD1-206ENST00000424922 ELP3Q9H9T3 547 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 RIC8AQ9NPQ8 531 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 PCDHA7Q9UN72 937 aa17.09■□□□□ 0.33
CALD1-206ENST00000424922 WNT7AO00755 349 aa17.08■□□□□ 0.33
CALD1-206ENST00000424922 TAL1P17542 331 aaPredicted RBP17.08■□□□□ 0.33
CALD1-206ENST00000424922 MARCKSP29966 332 aaPredicted RBP17.08■□□□□ 0.33
CALD1-206ENST00000424922 SNW1Q13573 536 aaKnown RBP17.08■□□□□ 0.33
CALD1-206ENST00000424922 ANO6Q4KMQ2 910 aa17.08■□□□□ 0.33
CALD1-206ENST00000424922 JAKMIP3Q5VZ66 844 aa17.08■□□□□ 0.33
CALD1-206ENST00000424922 NAP1L5Q96NT1 182 aaPredicted RBP17.08■□□□□ 0.33
CALD1-206ENST00000424922 SLF1Q9BQI6 1058 aa17.08■□□□□ 0.33
CALD1-206ENST00000424922 RANBP17Q9H2T7 1088 aaKnown RBP17.08■□□□□ 0.33
CALD1-206ENST00000424922 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.33
CALD1-206ENST00000424922 ZNF408Q9H9D4 720 aa17.08■□□□□ 0.33
CALD1-206ENST00000424922 TMEM260Q9NX78 707 aa17.08■□□□□ 0.33
CALD1-206ENST00000424922 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.08■□□□□ 0.33
CALD1-206ENST00000424922 FLOT1O75955 427 aa17.08■□□□□ 0.32
CALD1-206ENST00000424922 TERF1P54274 439 aa17.08■□□□□ 0.32
CALD1-206ENST00000424922 ARMC9Q7Z3E5 817 aa17.08■□□□□ 0.32
CALD1-206ENST00000424922 PRPF38AQ8NAV1 312 aaKnown RBP17.08■□□□□ 0.32
CALD1-206ENST00000424922 CUL5Q93034 780 aa17.08■□□□□ 0.32
CALD1-206ENST00000424922 GOLPH3LQ9H4A5 285 aa17.08■□□□□ 0.32
CALD1-206ENST00000424922 CBX8Q9HC52 389 aa17.08■□□□□ 0.32
CALD1-206ENST00000424922 MRPL12P52815 198 aaKnown RBP17.07■□□□□ 0.32
CALD1-206ENST00000424922 INF2Q27J81 1249 aa17.07■□□□□ 0.32
CALD1-206ENST00000424922 TTC38Q5R3I4 469 aa17.07■□□□□ 0.32
CALD1-206ENST00000424922 KRT25Q7Z3Z0 450 aa17.07■□□□□ 0.32
CALD1-206ENST00000424922 LDHDQ86WU2 507 aa17.07■□□□□ 0.32
CALD1-206ENST00000424922 MRPS27Q92552 414 aaKnown RBP17.07■□□□□ 0.32
CALD1-206ENST00000424922 TMOD4Q9NZQ9 345 aa17.07■□□□□ 0.32
CALD1-206ENST00000424922 AP5Z1O43299 807 aa17.06■□□□□ 0.32
CALD1-206ENST00000424922 KINO60870 393 aaKnown RBP17.06■□□□□ 0.32
CALD1-206ENST00000424922 TRAPPC10P48553 1259 aa17.06■□□□□ 0.32
CALD1-206ENST00000424922 ZNF174Q15697 407 aa17.06■□□□□ 0.32
CALD1-206ENST00000424922 UBE2SQ16763 222 aa17.06■□□□□ 0.32
CALD1-206ENST00000424922 OTUD5Q96G74 571 aa17.06■□□□□ 0.32
CALD1-206ENST00000424922 C12orf42Q96LP6 360 aa17.06■□□□□ 0.32
CALD1-206ENST00000424922 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.06■□□□□ 0.32
CALD1-206ENST00000424922 NONOQ15233 471 aaKnown RBP eCLIP17.06■□□□□ 0.32
CALD1-206ENST00000424922 ERO1BQ86YB8 467 aa17.06■□□□□ 0.32
CALD1-206ENST00000424922 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
CALD1-206ENST00000424922 RBM46Q8TBY0 533 aaKnown RBP17.06■□□□□ 0.32
CALD1-206ENST00000424922 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
CALD1-206ENST00000424922 PPP6R2O75170 966 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 PPATQ06203 517 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 JMYQ8N9B5 988 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 PPP1R9AQ9ULJ8 1098 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 GOLGA6L6A8MZA4 724 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 USP17L15C9J2P7 530 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 USP17L13C9JLJ4 530 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 USP17L11C9JVI0 530 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 USP17L18D6R9N7 530 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 USP17L22D6RA61 530 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 USP17L17D6RBQ6 530 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 USP17L19D6RCP7 530 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 USP17L20D6RJB6 530 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 IRF6O14896 467 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 CLK2P49760 499 aaKnown RBP17.05■□□□□ 0.32
CALD1-206ENST00000424922 USP17L24Q0WX57 530 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms