RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 DDX11Q96FC9 970 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 FGD4Q96M96 766 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 MAP3K14Q99558 947 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 RIOX1Q9H6W3 641 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 DIS3Q9Y2L1 958 aaKnown RBP12.73□□□□□ -0.37
TOP3B-203ENST00000424393 FRMPD3Q5JV73 1810 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 NFIBO00712 420 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 CYTH3O43739 400 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 DHX16O60231 1041 aaKnown RBP12.72□□□□□ -0.37
TOP3B-203ENST00000424393 SEC24BO95487 1268 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 CNTN2Q02246 1040 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 USH1GQ495M9 461 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 MFSD14CQ5VZR4 134 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 BLOC1S2Q6QNY1 142 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 TRPV1Q8NER1 839 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 CLEC4DQ8WXI8 215 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
TOP3B-203ENST00000424393 CYP39A1Q9NYL5 469 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 PNMA2Q9UL42 364 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 BRPF3Q9ULD4 1205 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 SLC12A7Q9Y666 1083 aa12.72□□□□□ -0.37
TOP3B-203ENST00000424393 PPP1R11O60927 126 aaPredicted RBP12.71□□□□□ -0.37
TOP3B-203ENST00000424393 SGPL1O95470 568 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 CYBAP13498 195 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 CASTP20810 708 aaKnown RBP12.71□□□□□ -0.37
TOP3B-203ENST00000424393 RPS6KB1P23443 525 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 PSMA5P28066 241 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 GJA8P48165 433 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 C8orf34Q49A92 452 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 APOA5Q6Q788 366 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 NSMFQ6X4W1 530 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 Q6ZUG5 572 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 CCDC144CPQ8IYA2 1237 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 FAM133AQ8N9E0 248 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
TOP3B-203ENST00000424393 U2AF1L4Q8WU68 220 aaKnown RBP12.71□□□□□ -0.37
TOP3B-203ENST00000424393 DEFB118Q96PH6 123 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 PIGSQ96S52 555 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 TINF2Q9BSI4 451 aa12.71□□□□□ -0.37
TOP3B-203ENST00000424393 BAZ2BQ9UIF8 2168 aaKnown RBP12.71□□□□□ -0.37
TOP3B-203ENST00000424393 LRRC37A2A6NM11 1700 aa12.71□□□□□ -0.38
TOP3B-203ENST00000424393 MCM3APO60318 1980 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 ASTN1O14525 1302 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 PFASO15067 1338 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 ABCB11O95342 1321 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 SOWAHBA6NEL2 793 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 DLL1O00548 723 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 ZBTB5O15062 677 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 PLEKHA8P1O95397 391 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 CALM1P0DP23 149 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 CALM2P0DP24 149 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 CALM3P0DP25 149 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 KIF5BP33176 963 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 BAATQ14032 418 aaPredicted RBP12.7□□□□□ -0.38
TOP3B-203ENST00000424393 PRAMEF19Q5SWL8 479 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 MAMDC4Q6UXC1 1216 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 ZNF467Q7Z7K2 595 aaPredicted RBP12.7□□□□□ -0.38
TOP3B-203ENST00000424393 MICU3Q86XE3 530 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 FBXO11Q86XK2 927 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 HOMER1Q86YM7 354 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
TOP3B-203ENST00000424393 SRBD1Q8N5C6 995 aaKnown RBP12.7□□□□□ -0.38
TOP3B-203ENST00000424393 FANCBQ8NB91 859 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 PURBQ96QR8 312 aaKnown RBP12.7□□□□□ -0.38
TOP3B-203ENST00000424393 SPZ1Q9BXG8 430 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 AGXT2Q9BYV1 514 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 CRISPLD2Q9H0B8 497 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
TOP3B-203ENST00000424393 KLF18A0A0U1RQI7 1052 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 SNAI1O95863 264 aaPredicted RBP12.69□□□□□ -0.38
TOP3B-203ENST00000424393 SMARCA1P28370 1054 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 APOBRQ0VD83 1088 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 LHX8Q68G74 356 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 SLC30A10Q6XR72 485 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 RUFY3Q7L099 469 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 FBXL16Q8N461 479 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 MSL3Q8N5Y2 521 aaKnown RBP12.69□□□□□ -0.38
TOP3B-203ENST00000424393 TBC1D5Q92609 795 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 BRF1Q92994 677 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 HTATIP2Q9BUP3 242 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 AMNQ9BXJ7 453 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 TM6SF1Q9BZW5 370 aa12.69□□□□□ -0.38
TOP3B-203ENST00000424393 SYNGAP1Q96PV0 1343 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 PTPDC1A2A3K4 754 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 OPLAHO14841 1288 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 ZBTB43O43298 467 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 ZNF865P0CJ78 1059 aaPredicted RBP12.68□□□□□ -0.38
TOP3B-203ENST00000424393 GNAQP50148 359 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 FGD1P98174 961 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 SYNE3Q6ZMZ3 975 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 RNF207Q6ZRF8 634 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 TMTC3Q6ZXV5 915 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 ARMCX2Q7L311 632 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 LZTS2Q9BRK4 669 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 UPF3BQ9BZI7 483 aaKnown RBP12.68□□□□□ -0.38
TOP3B-203ENST00000424393 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
TOP3B-203ENST00000424393 GTF3C3Q9Y5Q9 886 aa12.68□□□□□ -0.38
TOP3B-203ENST00000424393 NR2E3Q9Y5X4 410 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms