RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 USP14P54578 494 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 HUNKP57058 714 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 TFAP4Q01664 338 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 VGLL4Q14135 290 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 SLC4A8Q2Y0W8 1093 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 RRP12Q5JTH9 1297 aaKnown RBP8.24□□□□□ -1.09
EPHA4-206ENST00000424339 BLOC1S2Q6QNY1 142 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-206ENST00000424339 DHX32Q7L7V1 743 aaKnown RBP8.24□□□□□ -1.09
EPHA4-206ENST00000424339 SAPCD2Q86UD0 394 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 DGKHQ86XP1 1220 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 FBXL16Q8N461 479 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 SLC44A5Q8NCS7 719 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 SLC10A4Q96EP9 437 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 TBC1D32Q96NH3 1257 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 WDR18Q9BV38 432 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 ARHGEF10LQ9HCE6 1279 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 NYAP2Q9P242 653 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 SNX14Q9Y5W7 946 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 CYP46A1Q9Y6A2 500 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 NEDD4P46934 1319 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 IGKV6D-41A0A0C4DH26 115 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 FAM196BA6NMK8 535 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 B4E1Z4 1266 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 C19orf81C9J6K1 198 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 MPHOSPH10O00566 681 aaKnown RBP8.23□□□□□ -1.09
EPHA4-206ENST00000424339 CXCL11O14625 94 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 PRDM1O75626 825 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 PROCP04070 461 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 AKR1B1P15121 316 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 PTPRAP18433 802 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 INPP5BP32019 993 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 LIFRP42702 1097 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 ECE1P42892 770 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 NOVP48745 357 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 ICA1Q05084 483 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 DHX9Q08211 1270 aaKnown RBP8.23□□□□□ -1.09
EPHA4-206ENST00000424339 PPIL2Q13356 520 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 ANKRD1Q15327 319 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 CSPP1Q1MSJ5 1256 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 RUFY3Q7L099 469 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 MB21D2Q8IYB1 491 aaPredicted RBP8.23□□□□□ -1.09
EPHA4-206ENST00000424339 Q8N3U1 123 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 ZNF280CQ8ND82 737 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 ANKS1AQ92625 1134 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 LPAR1Q92633 364 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 JAKMIP1Q96N16 626 aaKnown RBP8.23□□□□□ -1.09
EPHA4-206ENST00000424339 PSMG3-AS1Q96PY0 264 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 ZSCAN10Q96SZ4 725 aaPredicted RBP8.23□□□□□ -1.09
EPHA4-206ENST00000424339 ZNF395Q9H8N7 513 aaPredicted RBP8.23□□□□□ -1.09
EPHA4-206ENST00000424339 MTMR4Q9NYA4 1195 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 ZSWIM5Q9P217 1185 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 ABT1Q9ULW3 272 aaKnown RBP8.23□□□□□ -1.09
EPHA4-206ENST00000424339 SNCAIPQ9Y6H5 919 aa8.23□□□□□ -1.09
EPHA4-206ENST00000424339 RASSF10A6NK89 507 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 UBE2Q2LH0YL09 131 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 ITGB2P05107 769 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 TOP1P11387 765 aaKnown RBP8.22□□□□□ -1.09
EPHA4-206ENST00000424339 CASTP20810 708 aaKnown RBP8.22□□□□□ -1.09
EPHA4-206ENST00000424339 RPS6KB1P23443 525 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 RCAN1P53805 252 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 INHBEP58166 350 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 FGD1P98174 961 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 PRKG1Q13976 671 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 GAS6Q14393 721 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 RAB3GAP1Q15042 981 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 RABEP1Q15276 862 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 RCSD1Q6JBY9 416 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 RGMBQ6NW40 437 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 FOXR1Q6PIV2 292 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 STOX1Q6ZVD7 989 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 ZKSCAN4Q969J2 545 aaPredicted RBP8.22□□□□□ -1.09
EPHA4-206ENST00000424339 MKL1Q969V6 931 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 CHMP4CQ96CF2 233 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 CEP95Q96GE4 821 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 KIAA1683Q9H0B3 1180 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 ALDH8A1Q9H2A2 487 aaPredicted RBP8.22□□□□□ -1.09
EPHA4-206ENST00000424339 GOPCQ9HD26 462 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 KCNH4Q9UQ05 1017 aa8.22□□□□□ -1.09
EPHA4-206ENST00000424339 MYH4Q9Y623 1939 aa8.21□□□□□ -1.09
EPHA4-206ENST00000424339 MANSC4A6NHS7 340 aaPredicted RBP8.21□□□□□ -1.1
EPHA4-206ENST00000424339 USP17L10C9JJH3 530 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 SMIM22K7EJ46 135 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 IFIT3O14879 490 aaKnown RBP8.21□□□□□ -1.1
EPHA4-206ENST00000424339 PRC1O43663 620 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 CALM1P0DP23 149 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 CALM2P0DP24 149 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 CALM3P0DP25 149 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 BCRP11274 1271 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 ZNF157P51786 506 aaPredicted RBP8.21□□□□□ -1.1
EPHA4-206ENST00000424339 GTF2A2P52657 109 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 C1QTNF8P60827 252 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 EXOSC10Q01780 885 aaKnown RBP8.21□□□□□ -1.1
EPHA4-206ENST00000424339 NOGQ13253 232 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 SNAPC2Q13487 334 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 WTAPQ15007 396 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 SEPT2Q15019 361 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 PPP2R5BQ15173 497 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 ADCK5Q3MIX3 580 aa8.21□□□□□ -1.1
EPHA4-206ENST00000424339 TMEM67Q5HYA8 995 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms