RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 CPA1P15085 419 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 KIF5BP33176 963 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 CNTN2Q02246 1040 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 COL9A3Q14050 684 aaPredicted RBP11.24□□□□□ -0.61
HERC3-204ENST00000422770 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 ZNF792Q3KQV3 632 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 BLOC1S2Q6QNY1 142 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 FBXO11Q86XK2 927 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 TMTC2Q8N394 836 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 SHISA4Q96DD7 197 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 TBC1D32Q96NH3 1257 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 TINF2Q9BSI4 451 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 C22orf23Q9BZE7 217 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 JMJD4Q9H9V9 463 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 PAK6Q9NQU5 681 aaPredicted RBP11.24□□□□□ -0.61
HERC3-204ENST00000422770 ZHX1Q9UKY1 873 aaPredicted RBP11.24□□□□□ -0.61
HERC3-204ENST00000422770 PNMA2Q9UL42 364 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 SNX14Q9Y5W7 946 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 HMGB1P09429 215 aaKnown RBP11.23□□□□□ -0.61
HERC3-204ENST00000422770 CYBAP13498 195 aa11.23□□□□□ -0.61
HERC3-204ENST00000422770 CASTP20810 708 aaKnown RBP11.23□□□□□ -0.61
HERC3-204ENST00000422770 HSPA4P34932 840 aa11.23□□□□□ -0.61
HERC3-204ENST00000422770 MAP3K21Q5TCX8 1036 aa11.23□□□□□ -0.61
HERC3-204ENST00000422770 SLC30A10Q6XR72 485 aa11.23□□□□□ -0.61
HERC3-204ENST00000422770 RNF207Q6ZRF8 634 aa11.23□□□□□ -0.61
HERC3-204ENST00000422770 DHX32Q7L7V1 743 aaKnown RBP11.23□□□□□ -0.61
HERC3-204ENST00000422770 DDX20Q9UHI6 824 aaKnown RBP11.23□□□□□ -0.61
HERC3-204ENST00000422770 DIS3Q9Y2L1 958 aaKnown RBP11.23□□□□□ -0.61
HERC3-204ENST00000422770 WDR19Q8NEZ3 1342 aa11.23□□□□□ -0.61
HERC3-204ENST00000422770 CENPFP49454 3210 aa11.23□□□□□ -0.61
HERC3-204ENST00000422770 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
HERC3-204ENST00000422770 ABCB11O95342 1321 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 CALM1P0DP23 149 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 CALM2P0DP24 149 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 CALM3P0DP25 149 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 PSMA5P28066 241 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 LIFRP42702 1097 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 TROAPQ12815 778 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 BAATQ14032 418 aaPredicted RBP11.22□□□□□ -0.61
HERC3-204ENST00000422770 NOL8Q76FK4 1167 aaKnown RBP11.22□□□□□ -0.61
HERC3-204ENST00000422770 ARMCX2Q7L311 632 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 CCDC82Q8N4S0 544 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 TRPV1Q8NER1 839 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 PURBQ96QR8 312 aaKnown RBP11.22□□□□□ -0.61
HERC3-204ENST00000422770 PIGSQ96S52 555 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 MTA3Q9BTC8 594 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 AMNQ9BXJ7 453 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 CYP39A1Q9NYL5 469 aa11.22□□□□□ -0.61
HERC3-204ENST00000422770 SEC63Q9UGP8 760 aaKnown RBP11.22□□□□□ -0.61
HERC3-204ENST00000422770 DNAJC25-GNG10A0A024R161 153 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 ASB14A6NK59 587 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 GOLGA8AA7E2F4 631 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 GOLGA8BA8MQT2 603 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 ZBTB5O15062 677 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 SEPT4O43236 478 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 MSCO60682 206 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 PLEKHA8P1O95397 391 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 CFBP00751 764 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 TSGA10IPQ3SY00 556 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 Q6ZUG5 572 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 EEPD1Q7L9B9 569 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 CMTR1Q8N1G2 835 aaKnown RBP11.21□□□□□ -0.61
HERC3-204ENST00000422770 DIS3LQ8TF46 1054 aaKnown RBP11.21□□□□□ -0.61
HERC3-204ENST00000422770 RRP36Q96EU6 259 aaKnown RBP11.21□□□□□ -0.61
HERC3-204ENST00000422770 PAWRQ96IZ0 340 aaKnown RBP11.21□□□□□ -0.61
HERC3-204ENST00000422770 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
HERC3-204ENST00000422770 USP26Q9BXU7 913 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.21□□□□□ -0.61
HERC3-204ENST00000422770 ADD3Q9UEY8 706 aaKnown RBP11.21□□□□□ -0.61
HERC3-204ENST00000422770 MRPL11Q9Y3B7 192 aaKnown RBP11.21□□□□□ -0.61
HERC3-204ENST00000422770 PCDHA1Q9Y5I3 950 aa11.21□□□□□ -0.61
HERC3-204ENST00000422770 DDX49Q9Y6V7 483 aaKnown RBP11.21□□□□□ -0.61
HERC3-204ENST00000422770 ALPK3Q96L96 1907 aa11.21□□□□□ -0.62
HERC3-204ENST00000422770 SYNGAP1Q96PV0 1343 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 KIAA1217Q5T5P2 1943 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 KBTBD13C9JR72 458 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 ZBTB43O43298 467 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 RARBP10826 455 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 AKR1A1P14550 325 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 RPS6KB1P23443 525 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 GNAQP50148 359 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 RPS6P62753 249 aaKnown RBP11.2□□□□□ -0.62
HERC3-204ENST00000422770 PDE4DQ08499 809 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 APOBRQ0VD83 1088 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 RTN1Q16799 776 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 GJC2Q5T442 439 aaPredicted RBP11.2□□□□□ -0.62
HERC3-204ENST00000422770 PRPF38BQ5VTL8 546 aaKnown RBP11.2□□□□□ -0.62
HERC3-204ENST00000422770 APOA5Q6Q788 366 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.2□□□□□ -0.62
HERC3-204ENST00000422770 NECAB2Q7Z6G3 386 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 ZNF467Q7Z7K2 595 aaPredicted RBP11.2□□□□□ -0.62
HERC3-204ENST00000422770 MCF2L2Q86YR7 1114 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 FAM133AQ8N9E0 248 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 CLEC4DQ8WXI8 215 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 DPF3Q92784 378 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 BRF1Q92994 677 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 LENG1Q96BZ8 264 aaPredicted RBP11.2□□□□□ -0.62
HERC3-204ENST00000422770 HTATIP2Q9BUP3 242 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms