RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 SPDYE2BA6NHP3 402 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 TMCO5BA8MYB1 307 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 SMIM22K7EJ46 135 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 CCDC172P0C7W6 258 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 SPDYE6P0CI01 402 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 PFKFB1P16118 471 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 SRBD1Q8N5C6 995 aaKnown RBP10.87□□□□□ -0.67
CMSS1-201ENST00000421999 CTNNBL1Q8WYA6 563 aaPredicted RBP10.87□□□□□ -0.67
CMSS1-201ENST00000421999 DDX25Q9UHL0 483 aaKnown RBP10.87□□□□□ -0.67
CMSS1-201ENST00000421999 LRRC37A3O60309 1634 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 PNMA6FA0A0J9YX94 578 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 RPS12P25398 132 aaKnown RBP10.87□□□□□ -0.67
CMSS1-201ENST00000421999 CTNNA2P26232 953 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 TTBK2Q6IQ55 1244 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 TBCKQ8TEA7 893 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 MAP7D2Q96T17 732 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 ELP3Q9H9T3 547 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 ANAPC4Q9UJX5 808 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 PDS5AQ29RF7 1337 aaKnown RBP10.87□□□□□ -0.67
CMSS1-201ENST00000421999 DDTLA6NHG4 134 aaPredicted RBP10.87□□□□□ -0.67
CMSS1-201ENST00000421999 ADCY5O95622 1261 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 GRM4Q14833 912 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 SLC39A14Q15043 492 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 SPOUT1Q5T280 376 aaKnown RBP10.87□□□□□ -0.67
CMSS1-201ENST00000421999 NELFCDQ8IXH7 590 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 TRMT1Q9NXH9 659 aaKnown RBP10.87□□□□□ -0.67
CMSS1-201ENST00000421999 COL18A1P39060 1754 aa10.87□□□□□ -0.67
CMSS1-201ENST00000421999 DDNO94850 711 aaPredicted RBP10.86□□□□□ -0.67
CMSS1-201ENST00000421999 HOXA13P31271 388 aaPredicted RBP10.86□□□□□ -0.67
CMSS1-201ENST00000421999 HUNKP57058 714 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 HSP90AA2PQ14568 343 aaPredicted RBP10.86□□□□□ -0.67
CMSS1-201ENST00000421999 GPT2Q8TD30 523 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 OXER1Q8TDS5 423 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 TEKT3Q9BXF9 490 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 CLSTN2Q9H4D0 955 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 ZDHHC9Q9Y397 364 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 PCDHB6Q9Y5E3 794 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 GCNT3O95395 438 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 OR52Z1P0C646 297 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 PTGS1P23219 599 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 HMGCS2P54868 508 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 HSP90B2PQ58FF3 399 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 LUZP1Q86V48 1076 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 DEPTORQ8TB45 409 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 KCNB2Q92953 911 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 CTAGE1Q96RT6 745 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 PSMD1Q99460 953 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 NT5C3AQ9H0P0 336 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 HOXC10Q9NYD6 342 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 ERLIN2O94905 339 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 CDC25AP30304 524 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 PRPF4BQ13523 1007 aaKnown RBP10.86□□□□□ -0.67
CMSS1-201ENST00000421999 PFKFB3Q16875 520 aaPredicted RBP10.86□□□□□ -0.67
CMSS1-201ENST00000421999 RCSD1Q6JBY9 416 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 C15orf52Q6ZUT6 534 aaKnown RBP10.86□□□□□ -0.67
CMSS1-201ENST00000421999 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
CMSS1-201ENST00000421999 MRPL44Q9H9J2 332 aaKnown RBP10.86□□□□□ -0.67
CMSS1-201ENST00000421999 SERTAD1Q9UHV2 236 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 PCDHAC2Q9Y5I4 1007 aa10.86□□□□□ -0.67
CMSS1-201ENST00000421999 KDM3BQ7LBC6 1761 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 ZNF157P51786 506 aaPredicted RBP10.85□□□□□ -0.67
CMSS1-201ENST00000421999 LRCH2Q5VUJ6 765 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 CNNM4Q6P4Q7 775 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 LINC00301Q8NCQ3 95 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 DOT1LQ8TEK3 1739 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 CETN3O15182 167 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 ZSCAN12O43309 604 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 NDUFA8P51970 172 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 RCAN1P53805 252 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 FAM102BQ5T8I3 360 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 APOBEC3HQ6NTF7 200 aaKnown RBP10.85□□□□□ -0.67
CMSS1-201ENST00000421999 RDH13Q8NBN7 331 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 DCAF4Q8WV16 495 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 GTPBP4Q9BZE4 634 aaKnown RBP10.85□□□□□ -0.67
CMSS1-201ENST00000421999 RAVER2Q9HCJ3 691 aaKnown RBP10.85□□□□□ -0.67
CMSS1-201ENST00000421999 DDX4Q9NQI0 724 aaKnown RBP10.85□□□□□ -0.67
CMSS1-201ENST00000421999 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 EXOC7Q9UPT5 735 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 ZBTB5O15062 677 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 EXOC3O60645 756 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 XRCC6P12956 609 aaKnown RBP eCLIP10.85□□□□□ -0.67
CMSS1-201ENST00000421999 CDR1P51861 262 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 RGS22Q8NE09 1264 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 CCDC112Q8NEF3 446 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 RGS17Q9UGC6 210 aaPredicted RBP10.85□□□□□ -0.67
CMSS1-201ENST00000421999 USP17L15C9J2P7 530 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 USP17L13C9JLJ4 530 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 USP17L11C9JVI0 530 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 USP17L18D6R9N7 530 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 USP17L22D6RA61 530 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 USP17L17D6RBQ6 530 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 USP17L19D6RCP7 530 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 USP17L20D6RJB6 530 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 KIF5CO60282 957 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 EPB41P11171 864 aaKnown RBP10.85□□□□□ -0.67
CMSS1-201ENST00000421999 CMA1P23946 247 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 TMOD1P28289 359 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 USP17L24Q0WX57 530 aa10.85□□□□□ -0.67
CMSS1-201ENST00000421999 TRPC3Q13507 836 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms