RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 NUP58Q9BVL2 599 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 OSBPL3Q9H4L5 887 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 CTAGE9A4FU28 777 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 PI16Q6UXB8 463 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 CCDC102AQ96A19 550 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 TRERF1Q96PN7 1200 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 MMS19Q96T76 1030 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 TLR3O15455 904 aaKnown RBP11.89□□□□□ -0.51
PTCH1-206ENST00000421141 MYL3P08590 195 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 TNFAIP3P21580 790 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 FAM83BQ5T0W9 1011 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 KIAA1841Q6NSI8 718 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 TMX1Q9H3N1 280 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 COL5A2P05997 1499 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-206ENST00000421141 MON2Q7Z3U7 1717 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 XRCC5P13010 732 aaKnown RBP11.89□□□□□ -0.51
PTCH1-206ENST00000421141 LONP1P36776 959 aaKnown RBP11.89□□□□□ -0.51
PTCH1-206ENST00000421141 PIH1D3Q9NQM4 214 aaKnown RBP11.89□□□□□ -0.51
PTCH1-206ENST00000421141 TRAPPC10P48553 1259 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 MLKLQ8NB16 471 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 GTF3C2Q8WUA4 911 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-206ENST00000421141 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 FOXP1Q9H334 677 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-206ENST00000421141 MAGEF1Q9HAY2 307 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 ADGRB1O14514 1584 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 NBPF26B4DH59 902 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 FDX1P10109 184 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 SF3B3Q15393 1217 aaKnown RBP11.88□□□□□ -0.51
PTCH1-206ENST00000421141 NBPF10Q6P3W6 841 aaKnown RBP11.88□□□□□ -0.51
PTCH1-206ENST00000421141 NBPF15Q8N660 670 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 AK8Q96MA6 479 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 COL14A1Q05707 1796 aaKnown RBP11.88□□□□□ -0.51
PTCH1-206ENST00000421141 N4BP1O75113 896 aaKnown RBP11.88□□□□□ -0.51
PTCH1-206ENST00000421141 CYP2E1P05181 493 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-206ENST00000421141 ASIC2Q16515 512 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 ZNF34Q8IZ26 560 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 STAG1Q8WVM7 1258 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 STXBP2Q15833 593 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 ZFYVE28Q9HCC9 887 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 FOXO4P98177 505 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 SCARF1Q14162 830 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 PDXDC2PQ6P474 469 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 MYOZ2Q9NPC6 264 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 TXNDC16Q9P2K2 825 aa11.88□□□□□ -0.51
PTCH1-206ENST00000421141 NWD1Q149M9 1564 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 PDIA3P30101 505 aaKnown RBP11.87□□□□□ -0.51
PTCH1-206ENST00000421141 TTLL4Q14679 1199 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 RIPOR2Q9Y4F9 1068 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 MMP14P50281 582 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 PTGDRQ13258 359 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 SNRNP48Q6IEG0 339 aaKnown RBP11.87□□□□□ -0.51
PTCH1-206ENST00000421141 OSBP2Q969R2 916 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 CSRNP2Q9H175 543 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 SPP2Q13103 211 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 NELFBQ8WX92 580 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 JAKMIP2Q96AA8 810 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 NACC1Q96RE7 527 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 PARK7Q99497 189 aaKnown RBP11.87□□□□□ -0.51
PTCH1-206ENST00000421141 ZSWIM5Q9P217 1185 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 BCCIPQ9P287 314 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTCH1-206ENST00000421141 TMEM191BP0C7N4 346 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 CYP2J2P51589 502 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 APOA5Q6Q788 366 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 SND1Q7KZF4 910 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTCH1-206ENST00000421141 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-206ENST00000421141 MTUS1Q9ULD2 1270 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 KIAA1024Q9UPX6 916 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 INO80B-WBP1J3KQ70 363 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 STAMBPO95630 424 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 CD19P15391 556 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 DCUN1D2Q6PH85 259 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 SESTD1Q86VW0 696 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 INO80BQ9C086 356 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-206ENST00000421141 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 GNG11P61952 73 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 NKX1-1Q15270 411 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-206ENST00000421141 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-206ENST00000421141 CCDC114Q96M63 670 aa11.87□□□□□ -0.51
PTCH1-206ENST00000421141 LSG1Q9H089 658 aaKnown RBP11.87□□□□□ -0.51
PTCH1-206ENST00000421141 CYP2D7A0A087X1C5 515 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 KIAA0754O94854 1291 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 UBXN2AP68543 259 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 ANGEL2Q5VTE6 544 aaKnown RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 MYOCDQ8IZQ8 938 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 CACTINQ8WUQ7 758 aaKnown RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 TSPYL1Q9H0U9 437 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 ABL1P00519 1130 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 ZSCAN30Q86W11 494 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 METTL23Q86XA0 190 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 GABPB2Q8TAK5 448 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 ANKRD36BP1Q96IX9 119 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 C16orf45Q96MC5 204 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 RMDN3Q96TC7 470 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 SEL1L2Q5TEA6 688 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 MROH1Q8NDA8 1641 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 MIS12Q9H081 205 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 ATP2A2P16615 1042 aaKnown RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 NBPF11Q86T75 865 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms