RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ST7Q9NRC1 585 aa13.49□□□□□ -0.25
CLCN4-203ENST00000421085 HADHQ16836 314 aaKnown RBP13.48□□□□□ -0.25
CLCN4-203ENST00000421085 EXOC3L4Q17RC7 722 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 TBC1D1Q86TI0 1168 aaPredicted RBP13.48□□□□□ -0.25
CLCN4-203ENST00000421085 TSC22D3Q99576 134 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 IFT122Q9HBG6 1241 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 TRPA1O75762 1119 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 STAM2O75886 525 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 CUL4AQ13619 759 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 ANKRD20A4Q4UJ75 823 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 ANKRD20A8PQ5CZ79 823 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 ANKRD20A2Q5SQ80 823 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 RBM26Q5T8P6 1007 aaKnown RBP13.48□□□□□ -0.25
CLCN4-203ENST00000421085 ANKRD20A1Q5TYW2 823 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 SCYL2Q6P3W7 929 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 GDAP1Q8TB36 358 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 PRPF6O94906 941 aaKnown RBP13.48□□□□□ -0.25
CLCN4-203ENST00000421085 TRIM37O94972 964 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 FTCDO95954 541 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 CFBP00751 764 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 LONP1P36776 959 aaKnown RBP13.48□□□□□ -0.25
CLCN4-203ENST00000421085 PHEXP78562 749 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 TMED2Q15363 201 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 ANKRD35Q8N283 1001 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 POLR3EQ9NVU0 708 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 INHBAP08476 426 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 ZYXQ15942 572 aaKnown RBP13.48□□□□□ -0.25
CLCN4-203ENST00000421085 C19orf44Q9H6X5 657 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 CARMIL3Q8ND23 1372 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 PGRMC1O00264 195 aaKnown RBP13.48□□□□□ -0.25
CLCN4-203ENST00000421085 YWHAGP61981 247 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLCN4-203ENST00000421085 ARID5BQ14865 1188 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 TCP11X2Q5H9J9 407 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 JADE1Q6IE81 842 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 IFNL3Q8IZI9 196 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 SLC24A3Q9HC58 644 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 PCDHA12Q9UN75 941 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 SH3TC1Q8TE82 1336 aa13.48□□□□□ -0.25
CLCN4-203ENST00000421085 FGAP02671 866 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 CCDC117Q8IWD4 279 aaPredicted RBP13.47□□□□□ -0.25
CLCN4-203ENST00000421085 GRAMD1CQ8IYS0 662 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 MAP4K1Q92918 833 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 SAMSN1Q9NSI8 373 aaKnown RBP13.47□□□□□ -0.25
CLCN4-203ENST00000421085 BZW2Q9Y6E2 419 aaKnown RBP13.47□□□□□ -0.25
CLCN4-203ENST00000421085 RNF8O76064 485 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 APOEP02649 317 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 MAPKAPK5Q8IW41 473 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 GPKOWQ92917 476 aaPredicted RBP eCLIP13.47□□□□□ -0.25
CLCN4-203ENST00000421085 SAT1P21673 171 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 PPM1KQ8N3J5 372 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 TGFBRAP1Q8WUH2 860 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 SDCCAG3Q96C92 435 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 MAD1L1Q9Y6D9 718 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 UFL1O94874 794 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.47□□□□□ -0.25
CLCN4-203ENST00000421085 TBK1Q9UHD2 729 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 INTUQ9ULD6 942 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 GCP02774 474 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 SCG2P13521 617 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 ASPHQ12797 758 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 SNX1Q13596 522 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 CUL4BQ13620 913 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 UNC5CLQ8IV45 518 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 NHEJ1Q9H9Q4 299 aaPredicted RBP13.47□□□□□ -0.25
CLCN4-203ENST00000421085 METTL14Q9HCE5 456 aaKnown RBP13.47□□□□□ -0.25
CLCN4-203ENST00000421085 NOP53Q9NZM5 478 aaKnown RBP13.47□□□□□ -0.25
CLCN4-203ENST00000421085 KIAA0232Q92628 1395 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
CLCN4-203ENST00000421085 GSTA1P08263 222 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 GSTA2P09210 222 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 NEK8Q86SG6 692 aa13.47□□□□□ -0.25
CLCN4-203ENST00000421085 PCDH11XQ9BZA7 1347 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 PCDH11YQ9BZA8 1340 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 NEURL1BA8MQ27 555 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 LMNB1P20700 586 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 ESRRGP62508 458 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 FAM26FQ5R3K3 315 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 RETREG2Q8NC44 543 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 NSUN7Q8NE18 718 aaKnown RBP13.46□□□□□ -0.25
CLCN4-203ENST00000421085 ANLNQ9NQW6 1124 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 HMGB1P1B2RPK0 211 aaPredicted RBP13.46□□□□□ -0.25
CLCN4-203ENST00000421085 MROH5Q6ZUA9 1318 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 ITSN2Q9NZM3 1697 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 TTC4O95801 387 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 TTBK2Q6IQ55 1244 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 CYP4F22Q6NT55 531 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 ZNF449Q6P9G9 518 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 FNBP4Q8N3X1 1017 aaPredicted RBP13.46□□□□□ -0.25
CLCN4-203ENST00000421085 PIP4K2CQ8TBX8 421 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 NSMCE1Q8WV22 266 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 HAUS8Q9BT25 410 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 ATP8A2Q9NTI2 1148 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 TNKSO95271 1327 aa13.46□□□□□ -0.25
CLCN4-203ENST00000421085 YTHDC2Q9H6S0 1430 aaKnown RBP13.46□□□□□ -0.25
CLCN4-203ENST00000421085 DENND4BO75064 1496 aaPredicted RBP13.46□□□□□ -0.25
CLCN4-203ENST00000421085 GAS7O60861 476 aa13.46□□□□□ -0.26
CLCN4-203ENST00000421085 DNAJC8O75937 253 aaPredicted RBP13.46□□□□□ -0.26
CLCN4-203ENST00000421085 NDUFA10O95299 355 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms