RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PRKRIP1Q9H875 184 aaPredicted RBP10.97□□□□□ -0.65
TRIM39-206ENST00000420746 MTUS1Q9ULD2 1270 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 PLXNA3P51805 1871 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 FAM186AA6NE01 2351 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 TANC1Q9C0D5 1861 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 SIP14410 1827 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.96□□□□□ -0.65
TRIM39-206ENST00000420746 EFCAB14O75071 495 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 PSMC6P62333 389 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 ZXDAP98168 799 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 BFSP2Q13515 415 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 NBPF20Q3BBV1 942 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 SNRNP48Q6IEG0 339 aaKnown RBP10.96□□□□□ -0.65
TRIM39-206ENST00000420746 NOL8Q76FK4 1167 aaKnown RBP10.96□□□□□ -0.65
TRIM39-206ENST00000420746 SIAH1Q8IUQ4 282 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 CCDC144CPQ8IYA2 1237 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 MRPL50Q8N5N7 158 aaKnown RBP10.96□□□□□ -0.65
TRIM39-206ENST00000420746 SAMD11Q96NU1 681 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 NSUN3Q9H649 340 aaKnown RBP10.96□□□□□ -0.65
TRIM39-206ENST00000420746 FBXO28Q9NVF7 368 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 FBXO40Q9UH90 709 aa10.96□□□□□ -0.65
TRIM39-206ENST00000420746 VPS13AQ96RL7 3174 aa10.96□□□□□ -0.66
TRIM39-206ENST00000420746 MBTPS2O43462 519 aa10.95□□□□□ -0.66
TRIM39-206ENST00000420746 PARNO95453 639 aaKnown RBP10.95□□□□□ -0.66
TRIM39-206ENST00000420746 CYP2E1P05181 493 aaPredicted RBP10.95□□□□□ -0.66
TRIM39-206ENST00000420746 CYP7A1P22680 504 aa10.95□□□□□ -0.66
TRIM39-206ENST00000420746 AVPR2P30518 371 aa10.95□□□□□ -0.66
TRIM39-206ENST00000420746 SIGLEC14Q08ET2 396 aa10.95□□□□□ -0.66
TRIM39-206ENST00000420746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRIM39-206ENST00000420746 POLR3EQ9NVU0 708 aa10.95□□□□□ -0.66
TRIM39-206ENST00000420746 GVINP1Q7Z2Y8 2422 aa10.95□□□□□ -0.66
TRIM39-206ENST00000420746 SCN5AQ14524 2016 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 ABHD14A-ACY1A0A1B0GW23 586 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 DYNC1LI2O43237 492 aaPredicted RBP10.94□□□□□ -0.66
TRIM39-206ENST00000420746 POLR3DP05423 398 aaPredicted RBP10.94□□□□□ -0.66
TRIM39-206ENST00000420746 LTBRP36941 435 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 VCPP55072 806 aaKnown RBP10.94□□□□□ -0.66
TRIM39-206ENST00000420746 DEFB103AP81534 67 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 PTPN11Q06124 597 aaPredicted RBP10.94□□□□□ -0.66
TRIM39-206ENST00000420746 SMAD4Q13485 552 aaKnown RBP10.94□□□□□ -0.66
TRIM39-206ENST00000420746 CTC1Q2NKJ3 1217 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 TCEAL5Q5H9L2 206 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 IQSEC1Q6DN90 963 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 NFRKBQ6P4R8 1299 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 ANKRD35Q8N283 1001 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 CHST13Q8NET6 341 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 ZNF512BQ96KM6 892 aaPredicted RBP10.94□□□□□ -0.66
TRIM39-206ENST00000420746 CLDND1Q9NY35 253 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 SWAP70Q9UH65 585 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 RIPK3Q9Y572 518 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 INSL6Q9Y581 213 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.94□□□□□ -0.66
TRIM39-206ENST00000420746 DMDP11532 3685 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 PTPRSQ13332 1948 aa10.94□□□□□ -0.66
TRIM39-206ENST00000420746 COL4A6Q14031 1691 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 MED19A0JLT2 244 aaPredicted RBP10.93□□□□□ -0.66
TRIM39-206ENST00000420746 ASB14A6NK59 587 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 H0Y858 1186 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 H3BNC9 293 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 STXBP3O00186 592 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 GALR2O43603 387 aaPredicted RBP10.93□□□□□ -0.66
TRIM39-206ENST00000420746 SMPD1P17405 629 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 PURAQ00577 322 aaKnown RBP10.93□□□□□ -0.66
TRIM39-206ENST00000420746 MTX1Q13505 466 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 MCTP2Q6DN12 878 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 RPAINQ86UA6 219 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 CCDC155Q8N6L0 562 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 MIGA1Q8NAN2 632 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 CAGE1Q8TC20 777 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 AFAP1L1Q8TED9 768 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 CCDC17Q96LX7 622 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 CRBNQ96SW2 442 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 SLF1Q9BQI6 1058 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 C17orf80Q9BSJ5 609 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 GOPCQ9HD26 462 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 TLR9Q9NR96 1032 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 DMXL1Q9Y485 3027 aa10.93□□□□□ -0.66
TRIM39-206ENST00000420746 SOWAHBA6NEL2 793 aa10.92□□□□□ -0.66
TRIM39-206ENST00000420746 CXCL10P02778 98 aa10.92□□□□□ -0.66
TRIM39-206ENST00000420746 OAZ1P54368 228 aa10.92□□□□□ -0.66
TRIM39-206ENST00000420746 CBX2Q14781 532 aaPredicted RBP10.92□□□□□ -0.66
TRIM39-206ENST00000420746 CCDC158Q5M9N0 1113 aa10.92□□□□□ -0.66
TRIM39-206ENST00000420746 TTC39AQ5SRH9 613 aa10.92□□□□□ -0.66
TRIM39-206ENST00000420746 EP400NLQ6ZTU2 488 aa10.92□□□□□ -0.66
TRIM39-206ENST00000420746 TMCO2Q7Z6W1 182 aaPredicted RBP10.92□□□□□ -0.66
TRIM39-206ENST00000420746 FAM133AQ8N9E0 248 aa10.92□□□□□ -0.66
TRIM39-206ENST00000420746 SP7Q8TDD2 431 aaPredicted RBP10.92□□□□□ -0.66
TRIM39-206ENST00000420746 ASIC4Q96FT7 647 aa10.92□□□□□ -0.66
TRIM39-206ENST00000420746 SNRKQ9NRH2 765 aa10.92□□□□□ -0.66
TRIM39-206ENST00000420746 CACNA1GO43497 2377 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 LOC730098B7Z3J9 87 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 USP17L21D6R901 530 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 CPT1AP50416 773 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 HTRA4P83105 476 aaPredicted RBP10.91□□□□□ -0.66
TRIM39-206ENST00000420746 RBL2Q08999 1139 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 EPC2Q52LR7 807 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 FAM83BQ5T0W9 1011 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 DGLUCYQ7Z3D6 616 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms