RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ERCC3P19447 782 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 PRCPP42785 496 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 ECE1P42892 770 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 IKQ13123 557 aaPredicted RBP9.94□□□□□ -0.82
SNCA-206ENST00000420646 CCAR2Q8N163 923 aaKnown RBP9.94□□□□□ -0.82
SNCA-206ENST00000420646 DAGLBQ8NCG7 672 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 GSDMAQ96QA5 445 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 CSRNP1Q96S65 589 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 TRIM34Q9BYJ4 488 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 A0A1W2PRG0 241 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 PSMD14O00487 310 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 NKRFO15226 690 aaKnown RBP eCLIP9.93□□□□□ -0.82
SNCA-206ENST00000420646 ADCY7P51828 1080 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 ZYXQ15942 572 aaKnown RBP9.93□□□□□ -0.82
SNCA-206ENST00000420646 ELOA2Q8IYF1 753 aaPredicted RBP9.93□□□□□ -0.82
SNCA-206ENST00000420646 FAM177A1Q8N128 213 aaPredicted RBP9.93□□□□□ -0.82
SNCA-206ENST00000420646 MMTAG2Q9BU76 263 aaKnown RBP9.93□□□□□ -0.82
SNCA-206ENST00000420646 VPS16Q9H269 839 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 SWAP70Q9UH65 585 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 TXLNAP40222 546 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 ICA1Q05084 483 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 ASPRV1Q53RT3 343 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 SLFN13Q68D06 897 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 SLC30A10Q6XR72 485 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 APTXQ7Z2E3 356 aaKnown RBP9.93□□□□□ -0.82
SNCA-206ENST00000420646 KRT25Q7Z3Z0 450 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 CABP7Q86V35 215 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 LARGE2Q8N3Y3 721 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 ZFP91Q96JP5 570 aaPredicted RBP9.93□□□□□ -0.82
SNCA-206ENST00000420646 P2RX7Q99572 595 aaKnown RBP9.93□□□□□ -0.82
SNCA-206ENST00000420646 VEZTQ9HBM0 779 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 F5H6K3 240 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 IGSF3O75054 1194 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 TPM2P07951 284 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 FCER1AP12319 257 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 GSDMDP57764 484 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 KLRC3Q07444 240 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 QRICH1Q2TAL8 776 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 TRIML1Q8N9V2 468 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 MYRIPQ8NFW9 859 aa9.93□□□□□ -0.82
SNCA-206ENST00000420646 CCDC12Q8WUD4 166 aaPredicted RBP9.93□□□□□ -0.82
SNCA-206ENST00000420646 CENPFP49454 3210 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 PNMA6FA0A0J9YX94 578 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 GTPBP6O43824 516 aaPredicted RBP9.92□□□□□ -0.82
SNCA-206ENST00000420646 KCNA3P22001 575 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 MTF1Q14872 753 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 KMT5BQ4FZB7 885 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 KIAA1755Q5JYT7 1200 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 SPATA1Q5VX52 437 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 DYMQ7RTS9 669 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 NELFBQ8WX92 580 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 PSTPIP2Q9H939 334 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 IMPACTQ9P2X3 320 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.92□□□□□ -0.82
SNCA-206ENST00000420646 PCDHA1Q9Y5I3 950 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 V9GYY5 206 aaPredicted RBP9.92□□□□□ -0.82
SNCA-206ENST00000420646 A0A0U1RQJ8 604 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 ERCC5P28715 1186 aaPredicted RBP9.92□□□□□ -0.82
SNCA-206ENST00000420646 NR1I3Q14994 352 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 CALCRLQ16602 461 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 ECM1Q16610 540 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 ABCB5Q2M3G0 1257 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 GALNT17Q6IS24 598 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 KCNK18Q7Z418 384 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 TTLL6Q8N841 843 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 ACER1Q8TDN7 264 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 ATRIPQ8WXE1 791 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 DESI2Q9BSY9 194 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 TMEM39BQ9GZU3 492 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 TAB2Q9NYJ8 693 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 DACH1Q9UI36 760 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 SERPINA10Q9UK55 444 aa9.92□□□□□ -0.82
SNCA-206ENST00000420646 RNF225M0QZC1 329 aaPredicted RBP9.91□□□□□ -0.82
SNCA-206ENST00000420646 PES1O00541 588 aaKnown RBP9.91□□□□□ -0.82
SNCA-206ENST00000420646 ZBTB5O15062 677 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 STK4Q13043 487 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 PTPN14Q15678 1187 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 RBM26Q5T8P6 1007 aaKnown RBP9.91□□□□□ -0.82
SNCA-206ENST00000420646 CCDC34Q96HJ3 373 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 PPP1R13BQ96KQ4 1090 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 IDI2Q9BXS1 227 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 PLIN4Q96Q06 1357 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 CBFA2T2O43439 604 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 KLRC4O43908 158 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 NDUFB10O96000 172 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 EGFRP00533 1210 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 HOXA13P31271 388 aaPredicted RBP9.91□□□□□ -0.82
SNCA-206ENST00000420646 RAD51AP2Q09MP3 1159 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 SPECC1LQ69YQ0 1117 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 TC2NQ8N9U0 490 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 GLIS3Q8NEA6 775 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 POLD4Q9HCU8 107 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 COL4A5P29400 1685 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 MCM6Q14566 821 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 CDC37Q16543 378 aaPredicted RBP9.91□□□□□ -0.82
SNCA-206ENST00000420646 CCDC125Q86Z20 511 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 GLIS2Q9BZE0 524 aaPredicted RBP9.91□□□□□ -0.82
SNCA-206ENST00000420646 KANSL2Q9H9L4 492 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 KBTBD4Q9NVX7 518 aa9.91□□□□□ -0.82
SNCA-206ENST00000420646 LRWD1Q9UFC0 647 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms