RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 RABGGTBP53611 331 aa15.34■□□□□ 0.05
LINC00339-203ENST00000420503 CCL23P55773 120 aa15.34■□□□□ 0.05
LINC00339-203ENST00000420503 TFAP4Q01664 338 aa15.34■□□□□ 0.05
LINC00339-203ENST00000420503 CTDSPL2Q05D32 466 aa15.34■□□□□ 0.05
LINC00339-203ENST00000420503 PPIGQ13427 754 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC00339-203ENST00000420503 TLK2Q86UE8 772 aa15.34■□□□□ 0.05
LINC00339-203ENST00000420503 PCSK9Q8NBP7 692 aaKnown RBP15.34■□□□□ 0.05
LINC00339-203ENST00000420503 WNT8AQ9H1J5 351 aa15.34■□□□□ 0.05
LINC00339-203ENST00000420503 ACAD9Q9H845 621 aa15.34■□□□□ 0.05
LINC00339-203ENST00000420503 SCN5AQ14524 2016 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 TSPY3P0CV98 308 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 TSPY8P0CW00 308 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 ALAS1P13196 640 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 TNFAIP2Q03169 654 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 PPARAQ07869 468 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 OTOP2Q7RTS6 562 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 PI4K2BQ8TCG2 481 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 DCTPP1Q9H773 170 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 IL17RBQ9NRM6 502 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 REV3LO60673 3130 aa15.33■□□□□ 0.04
LINC00339-203ENST00000420503 TCF20Q9UGU0 1960 aaKnown RBP15.33■□□□□ 0.04
LINC00339-203ENST00000420503 PATL2C9JE40 543 aaKnown RBP15.32■□□□□ 0.04
LINC00339-203ENST00000420503 DYNC1LI2O43237 492 aaPredicted RBP15.32■□□□□ 0.04
LINC00339-203ENST00000420503 B4GALT4O60513 344 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 OAZ1P54368 228 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 TJAP1Q5JTD0 557 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 TTBK2Q6IQ55 1244 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 TAPT1Q6NXT6 567 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 TMEM199Q8N511 208 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 SLC43A3Q8NBI5 491 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 SCLYQ96I15 445 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 TRERF1Q96PN7 1200 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 HIPK3Q9H422 1215 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 IL23AQ9NPF7 189 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 FBXO40Q9UH90 709 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC00339-203ENST00000420503 MROH7Q68CQ1 1323 aa15.32■□□□□ 0.04
LINC00339-203ENST00000420503 PRRC2BQ5JSZ5 2229 aaKnown RBP15.31■□□□□ 0.04
LINC00339-203ENST00000420503 SLC1A4P43007 532 aa15.31■□□□□ 0.04
LINC00339-203ENST00000420503 STAT2P52630 851 aa15.31■□□□□ 0.04
LINC00339-203ENST00000420503 NKX3-2P78367 333 aa15.31■□□□□ 0.04
LINC00339-203ENST00000420503 IKQ13123 557 aaPredicted RBP15.31■□□□□ 0.04
LINC00339-203ENST00000420503 ITGA7Q13683 1181 aa15.31■□□□□ 0.04
LINC00339-203ENST00000420503 FSCN1Q16658 493 aaKnown RBP15.31■□□□□ 0.04
LINC00339-203ENST00000420503 VPS53Q5VIR6 699 aa15.31■□□□□ 0.04
LINC00339-203ENST00000420503 PIAS4Q8N2W9 510 aaPredicted RBP15.31■□□□□ 0.04
LINC00339-203ENST00000420503 STAG1Q8WVM7 1258 aa15.31■□□□□ 0.04
LINC00339-203ENST00000420503 HERVK_113Q902F9 699 aa15.31■□□□□ 0.04
LINC00339-203ENST00000420503 NECAB3Q96P71 396 aaPredicted RBP15.31■□□□□ 0.04
LINC00339-203ENST00000420503 NOC4LQ9BVI4 516 aaKnown RBP15.31■□□□□ 0.04
LINC00339-203ENST00000420503 SPC25Q9HBM1 224 aa15.31■□□□□ 0.04
LINC00339-203ENST00000420503 PRR12Q9ULL5 1215 aa15.31■□□□□ 0.04
LINC00339-203ENST00000420503 GNAT2P19087 354 aa15.3■□□□□ 0.04
LINC00339-203ENST00000420503 IGFBP4P22692 258 aa15.3■□□□□ 0.04
LINC00339-203ENST00000420503 SLC16A2P36021 539 aa15.3■□□□□ 0.04
LINC00339-203ENST00000420503 ZMYM1Q5SVZ6 1142 aa15.3■□□□□ 0.04
LINC00339-203ENST00000420503 PSRC1Q6PGN9 363 aaPredicted RBP15.3■□□□□ 0.04
LINC00339-203ENST00000420503 NSMFQ6X4W1 530 aa15.3■□□□□ 0.04
LINC00339-203ENST00000420503 GMCL1Q96IK5 515 aa15.3■□□□□ 0.04
LINC00339-203ENST00000420503 NAPBQ9H115 298 aa15.3■□□□□ 0.04
LINC00339-203ENST00000420503 TRMT13Q9NUP7 481 aaKnown RBP15.3■□□□□ 0.04
LINC00339-203ENST00000420503 CYP39A1Q9NYL5 469 aa15.3■□□□□ 0.04
LINC00339-203ENST00000420503 STX8Q9UNK0 236 aa15.3■□□□□ 0.04
LINC00339-203ENST00000420503 PCDHB15Q9Y5E8 787 aa15.3■□□□□ 0.04
LINC00339-203ENST00000420503 RFXAPO00287 272 aa15.29■□□□□ 0.04
LINC00339-203ENST00000420503 NFIBO00712 420 aa15.29■□□□□ 0.04
LINC00339-203ENST00000420503 TLR3O15455 904 aaKnown RBP15.29■□□□□ 0.04
LINC00339-203ENST00000420503 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
LINC00339-203ENST00000420503 CYP2C9P11712 490 aa15.29■□□□□ 0.04
LINC00339-203ENST00000420503 GAS2L1Q99501 681 aaPredicted RBP15.29■□□□□ 0.04
LINC00339-203ENST00000420503 FSD1Q9BTV5 496 aa15.29■□□□□ 0.04
LINC00339-203ENST00000420503 TET1Q8NFU7 2136 aa15.29■□□□□ 0.04
LINC00339-203ENST00000420503 FRMPD2Q68DX3 1309 aaPredicted RBP15.28■□□□□ 0.04
LINC00339-203ENST00000420503 TNFRSF10AO00220 468 aa15.28■□□□□ 0.04
LINC00339-203ENST00000420503 ARHGEF15O94989 841 aa15.28■□□□□ 0.04
LINC00339-203ENST00000420503 FGBP02675 491 aa15.28■□□□□ 0.04
LINC00339-203ENST00000420503 TTLL4Q14679 1199 aa15.28■□□□□ 0.04
LINC00339-203ENST00000420503 SLC30A10Q6XR72 485 aa15.28■□□□□ 0.04
LINC00339-203ENST00000420503 GPATCH3Q96I76 525 aa15.28■□□□□ 0.04
LINC00339-203ENST00000420503 CCPG1Q9ULG6 757 aa15.28■□□□□ 0.04
LINC00339-203ENST00000420503 SYNPO2Q9UMS6 1093 aa15.28■□□□□ 0.04
LINC00339-203ENST00000420503 EPOPA6NHQ4 379 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 ASB14A6NK59 587 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 PDE4BQ07343 736 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 BAATQ14032 418 aaPredicted RBP15.27■□□□□ 0.04
LINC00339-203ENST00000420503 CCDC96Q2M329 555 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 KRT40Q6A162 431 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 RCSD1Q6JBY9 416 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 KIAA1211Q6ZU35 1233 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 SPRED2Q7Z698 418 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 FAM160B2Q86V87 743 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 MICALL1Q8N3F8 863 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 ADAMTS19Q8TE59 1207 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 SYMPKQ92797 1274 aaKnown RBP15.27■□□□□ 0.04
LINC00339-203ENST00000420503 AP5M1Q9H0R1 490 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 CERS4Q9HA82 394 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 THEGQ9P2T0 379 aa15.27■□□□□ 0.04
LINC00339-203ENST00000420503 TSPY2A6NKD2 308 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 COL9A1P20849 921 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 TFF2Q03403 129 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms