RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 TLE2Q04725 743 aa25.05■■□□□ 1.6
PTPN4-202ENST00000420482 KCNA10Q16322 511 aa25.05■■□□□ 1.6
PTPN4-202ENST00000420482 GPATCH4Q5T3I0 446 aaKnown RBP25.05■■□□□ 1.6
PTPN4-202ENST00000420482 NOL8Q76FK4 1167 aaKnown RBP25.05■■□□□ 1.6
PTPN4-202ENST00000420482 RASGRP2Q7LDG7 609 aa25.05■■□□□ 1.6
PTPN4-202ENST00000420482 KLHDC9Q8NEP7 349 aa25.05■■□□□ 1.6
PTPN4-202ENST00000420482 PDLIM7Q9NR12 457 aa25.05■■□□□ 1.6
PTPN4-202ENST00000420482 CYP39A1Q9NYL5 469 aa25.05■■□□□ 1.6
PTPN4-202ENST00000420482 STXBP5LQ9Y2K9 1186 aa25.05■■□□□ 1.6
PTPN4-202ENST00000420482 DCDC2CA8MYV0 355 aa25.04■■□□□ 1.6
PTPN4-202ENST00000420482 CLTBP09497 229 aa25.04■■□□□ 1.6
PTPN4-202ENST00000420482 GJA9P57773 515 aa25.04■■□□□ 1.6
PTPN4-202ENST00000420482 TTBK2Q6IQ55 1244 aa25.04■■□□□ 1.6
PTPN4-202ENST00000420482 MPHOSPH6Q99547 160 aaKnown RBP25.04■■□□□ 1.6
PTPN4-202ENST00000420482 MROH7Q68CQ1 1323 aa25.04■■□□□ 1.6
PTPN4-202ENST00000420482 PQBP1O60828 265 aaKnown RBP25.03■■□□□ 1.6
PTPN4-202ENST00000420482 TNFAIP2Q03169 654 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 ZNF543Q08ER8 600 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 MUM1L1Q5H9M0 696 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 GNASQ5JWF2 1037 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 VTI1AQ96AJ9 217 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 TOX2Q96NM4 488 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 KRT23Q9C075 422 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 KAT14Q9H8E8 782 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 CNNM2Q9H8M5 875 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 ELP1O95163 1332 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 NEDD4P46934 1319 aa25.03■■□□□ 1.6
PTPN4-202ENST00000420482 LOC102724159A0A0B4J2E5 919 aa25.02■■□□□ 1.6
PTPN4-202ENST00000420482 SOWAHBA6NEL2 793 aa25.02■■□□□ 1.6
PTPN4-202ENST00000420482 DLL1O00548 723 aa25.02■■□□□ 1.6
PTPN4-202ENST00000420482 KDM4AO75164 1064 aa25.02■■□□□ 1.6
PTPN4-202ENST00000420482 PWP2Q15269 919 aaKnown RBP25.02■■□□□ 1.6
PTPN4-202ENST00000420482 RUFY2Q8WXA3 655 aa25.02■■□□□ 1.6
PTPN4-202ENST00000420482 UPF3AQ9H1J1 476 aaKnown RBP25.02■■□□□ 1.6
PTPN4-202ENST00000420482 LAMA4Q16363 1823 aa25.02■■□□□ 1.6
PTPN4-202ENST00000420482 SNHG28P0DPA3 235 aa25.01■■□□□ 1.59
PTPN4-202ENST00000420482 RAG1P15918 1043 aa25.01■■□□□ 1.59
PTPN4-202ENST00000420482 ANKRD33Q7Z3H0 272 aa25.01■■□□□ 1.59
PTPN4-202ENST00000420482 BADQ92934 168 aa25.01■■□□□ 1.59
PTPN4-202ENST00000420482 ZKSCAN3Q9BRR0 538 aa25.01■■□□□ 1.59
PTPN4-202ENST00000420482 TMEM39AQ9NV64 488 aa25.01■■□□□ 1.59
PTPN4-202ENST00000420482 PTPDC1A2A3K4 754 aa25■■□□□ 1.59
PTPN4-202ENST00000420482 ASGR1P07306 291 aa25■■□□□ 1.59
PTPN4-202ENST00000420482 TTC22Q5TAA0 569 aa25■■□□□ 1.59
PTPN4-202ENST00000420482 IQSEC1Q6DN90 963 aa25■■□□□ 1.59
PTPN4-202ENST00000420482 CCSAPQ6IQ19 270 aaPredicted RBP25■■□□□ 1.59
PTPN4-202ENST00000420482 PNMA1Q8ND90 353 aa25■■□□□ 1.59
PTPN4-202ENST00000420482 KATNBL1Q9H079 304 aa25■■□□□ 1.59
PTPN4-202ENST00000420482 AP5M1Q9H0R1 490 aa25■■□□□ 1.59
PTPN4-202ENST00000420482 VTA1Q9NP79 307 aa25■■□□□ 1.59
PTPN4-202ENST00000420482 WDR19Q8NEZ3 1342 aa25■■□□□ 1.59
PTPN4-202ENST00000420482 RAD50Q92878 1312 aa25■■□□□ 1.59
PTPN4-202ENST00000420482 LAMA2P24043 3122 aaKnown RBP24.99■■□□□ 1.59
PTPN4-202ENST00000420482 A0A0C4DFX4 3053 aa24.99■■□□□ 1.59
PTPN4-202ENST00000420482 B4DLN1 442 aa24.99■■□□□ 1.59
PTPN4-202ENST00000420482 ZEB2O60315 1214 aa24.99■■□□□ 1.59
PTPN4-202ENST00000420482 MCM3APO60318 1980 aa24.99■■□□□ 1.59
PTPN4-202ENST00000420482 MRPL12P52815 198 aaKnown RBP24.99■■□□□ 1.59
PTPN4-202ENST00000420482 BAATQ14032 418 aaPredicted RBP24.99■■□□□ 1.59
PTPN4-202ENST00000420482 ZSCAN10Q96SZ4 725 aaPredicted RBP24.99■■□□□ 1.59
PTPN4-202ENST00000420482 UBAC1Q9BSL1 405 aa24.99■■□□□ 1.59
PTPN4-202ENST00000420482 A0A0U1RQG5 324 aaPredicted RBP24.98■■□□□ 1.59
PTPN4-202ENST00000420482 TRIM43BA6NCK2 446 aa24.98■■□□□ 1.59
PTPN4-202ENST00000420482 B4E1Z4 1266 aa24.98■■□□□ 1.59
PTPN4-202ENST00000420482 KIAA0355O15063 1070 aa24.98■■□□□ 1.59
PTPN4-202ENST00000420482 CABYRO75952 493 aa24.98■■□□□ 1.59
PTPN4-202ENST00000420482 FAM109BQ6ICB4 259 aaPredicted RBP24.98■■□□□ 1.59
PTPN4-202ENST00000420482 RNF207Q6ZRF8 634 aa24.98■■□□□ 1.59
PTPN4-202ENST00000420482 SH3RF1Q7Z6J0 888 aa24.98■■□□□ 1.59
PTPN4-202ENST00000420482 TRIM43Q96BQ3 446 aaPredicted RBP24.98■■□□□ 1.59
PTPN4-202ENST00000420482 MYADML2A6NDP7 307 aa24.97■■□□□ 1.59
PTPN4-202ENST00000420482 TLR3O15455 904 aaKnown RBP24.97■■□□□ 1.59
PTPN4-202ENST00000420482 ADCY6O43306 1168 aa24.97■■□□□ 1.59
PTPN4-202ENST00000420482 NKX3-2P78367 333 aa24.97■■□□□ 1.59
PTPN4-202ENST00000420482 TRDNQ13061 729 aa24.97■■□□□ 1.59
PTPN4-202ENST00000420482 TLK2Q86UE8 772 aa24.97■■□□□ 1.59
PTPN4-202ENST00000420482 ANKS1AQ92625 1134 aa24.97■■□□□ 1.59
PTPN4-202ENST00000420482 Q9Y3F1 56 aa24.97■■□□□ 1.59
PTPN4-202ENST00000420482 NFIBO00712 420 aa24.96■■□□□ 1.59
PTPN4-202ENST00000420482 ALDH5A1P51649 535 aaPredicted RBP24.96■■□□□ 1.59
PTPN4-202ENST00000420482 ASPRV1Q53RT3 343 aa24.96■■□□□ 1.59
PTPN4-202ENST00000420482 EEPD1Q7L9B9 569 aa24.96■■□□□ 1.59
PTPN4-202ENST00000420482 MORC4Q8TE76 937 aa24.96■■□□□ 1.59
PTPN4-202ENST00000420482 SEZ6LQ9BYH1 1024 aa24.96■■□□□ 1.59
PTPN4-202ENST00000420482 MAF1Q9H063 256 aa24.96■■□□□ 1.59
PTPN4-202ENST00000420482 ZSWIM5Q9P217 1185 aa24.96■■□□□ 1.59
PTPN4-202ENST00000420482 TNKSO95271 1327 aa24.95■■□□□ 1.58
PTPN4-202ENST00000420482 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.95■■□□□ 1.58
PTPN4-202ENST00000420482 ARVCFO00192 962 aa24.95■■□□□ 1.58
PTPN4-202ENST00000420482 GOLGA8HP0CJ92 632 aa24.95■■□□□ 1.58
PTPN4-202ENST00000420482 CALML3P27482 149 aa24.95■■□□□ 1.58
PTPN4-202ENST00000420482 FAAP100Q0VG06 881 aa24.95■■□□□ 1.58
PTPN4-202ENST00000420482 FSCN1Q16658 493 aaKnown RBP24.95■■□□□ 1.58
PTPN4-202ENST00000420482 KIAA1211Q6ZU35 1233 aa24.95■■□□□ 1.58
PTPN4-202ENST00000420482 FBXO16Q8IX29 292 aaPredicted RBP24.95■■□□□ 1.58
PTPN4-202ENST00000420482 GNEQ9Y223 722 aaKnown RBP24.95■■□□□ 1.58
PTPN4-202ENST00000420482 DYNC1LI2O43237 492 aaPredicted RBP24.94■■□□□ 1.58
PTPN4-202ENST00000420482 PARP1P09874 1014 aaKnown RBP24.94■■□□□ 1.58
PTPN4-202ENST00000420482 PDE4AP27815 886 aa24.94■■□□□ 1.58
PTPN4-202ENST00000420482 FPGSQ05932 587 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms