RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 USH1GQ495M9 461 aa23.95■■□□□ 1.42
HMGXB4-203ENST00000420166 HOMER1Q86YM7 354 aa23.95■■□□□ 1.42
HMGXB4-203ENST00000420166 NPLOC4Q8TAT6 608 aa23.95■■□□□ 1.42
HMGXB4-203ENST00000420166 SH3TC2Q8TF17 1288 aa23.95■■□□□ 1.42
HMGXB4-203ENST00000420166 ARMC5Q96C12 935 aa23.95■■□□□ 1.42
HMGXB4-203ENST00000420166 PIGSQ96S52 555 aa23.95■■□□□ 1.42
HMGXB4-203ENST00000420166 ALDH8A1Q9H2A2 487 aaPredicted RBP23.95■■□□□ 1.42
HMGXB4-203ENST00000420166 SLC5A4Q9NY91 659 aa23.95■■□□□ 1.42
HMGXB4-203ENST00000420166 RBBP6Q7Z6E9 1792 aaKnown RBP23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 ABCB11O95342 1321 aa23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 PPP1R11O60927 126 aaPredicted RBP23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 PPP2R5BQ15173 497 aa23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 TRMT44Q8IYL2 757 aaKnown RBP23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 CMTR1Q8N1G2 835 aaKnown RBP23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 ANKRD35Q8N283 1001 aa23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 TRIB2Q92519 343 aa23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 DDX11Q96FC9 970 aa23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 AMNQ9BXJ7 453 aa23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 BACH2Q9BYV9 841 aa23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 A1CFQ9NQ94 594 aaKnown RBP23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 FAM217BQ9NTX9 383 aaPredicted RBP23.94■■□□□ 1.42
HMGXB4-203ENST00000420166 DNAJC25-GNG10A0A024R161 153 aa23.93■■□□□ 1.42
HMGXB4-203ENST00000420166 PNMA6FA0A0J9YX94 578 aa23.93■■□□□ 1.42
HMGXB4-203ENST00000420166 PGK2P07205 417 aa23.93■■□□□ 1.42
HMGXB4-203ENST00000420166 PDIA3P30101 505 aaKnown RBP23.93■■□□□ 1.42
HMGXB4-203ENST00000420166 CDC27P30260 824 aa23.93■■□□□ 1.42
HMGXB4-203ENST00000420166 CCL14Q16627 93 aa23.93■■□□□ 1.42
HMGXB4-203ENST00000420166 CLEC4DQ8WXI8 215 aa23.93■■□□□ 1.42
HMGXB4-203ENST00000420166 RRP36Q96EU6 259 aaKnown RBP23.93■■□□□ 1.42
HMGXB4-203ENST00000420166 KIF2CQ99661 725 aa23.93■■□□□ 1.42
HMGXB4-203ENST00000420166 LCTP09848 1927 aa23.92■■□□□ 1.42
HMGXB4-203ENST00000420166 PFASO15067 1338 aa23.92■■□□□ 1.42
HMGXB4-203ENST00000420166 CCDC196A0A1B0GTZ2 297 aa23.92■■□□□ 1.42
HMGXB4-203ENST00000420166 NFIBO00712 420 aa23.92■■□□□ 1.42
HMGXB4-203ENST00000420166 HMGCRP04035 888 aa23.92■■□□□ 1.42
HMGXB4-203ENST00000420166 NEK4P51957 841 aa23.92■■□□□ 1.42
HMGXB4-203ENST00000420166 PIBF1Q8WXW3 757 aa23.92■■□□□ 1.42
HMGXB4-203ENST00000420166 ZNF333Q96JL9 665 aa23.92■■□□□ 1.42
HMGXB4-203ENST00000420166 LARP6Q9BRS8 491 aaKnown RBP23.92■■□□□ 1.42
HMGXB4-203ENST00000420166 BIN2Q9UBW5 565 aaPredicted RBP23.92■■□□□ 1.42
HMGXB4-203ENST00000420166 CNTNAP5Q8WYK1 1306 aa23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 INHAP05111 366 aa23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 AK2P54819 239 aa23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 FUT2Q10981 343 aa23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 ANKRD1Q15327 319 aa23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 ZNF792Q3KQV3 632 aa23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 NSMFQ6X4W1 530 aa23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 CCDC82Q8N4S0 544 aa23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 ZNF274Q96GC6 653 aaPredicted RBP23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 CYP39A1Q9NYL5 469 aa23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 FLRT1Q9NZU1 646 aa23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 SEC63Q9UGP8 760 aaKnown RBP23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 DIS3Q9Y2L1 958 aaKnown RBP23.91■■□□□ 1.42
HMGXB4-203ENST00000420166 ADD1P35611 737 aaKnown RBP23.9■■□□□ 1.42
HMGXB4-203ENST00000420166 TRAF1Q13077 416 aa23.9■■□□□ 1.42
HMGXB4-203ENST00000420166 OLFML2BQ68BL8 750 aa23.9■■□□□ 1.42
HMGXB4-203ENST00000420166 MAML3Q96JK9 1138 aa23.9■■□□□ 1.42
HMGXB4-203ENST00000420166 TBC1D32Q96NH3 1257 aa23.9■■□□□ 1.42
HMGXB4-203ENST00000420166 MRPL11Q9Y3B7 192 aaKnown RBP23.9■■□□□ 1.42
HMGXB4-203ENST00000420166 PCDHA1Q9Y5I3 950 aa23.9■■□□□ 1.42
HMGXB4-203ENST00000420166 MCM3APO60318 1980 aa23.89■■□□□ 1.42
HMGXB4-203ENST00000420166 IGHA2P01877 340 aa23.89■■□□□ 1.41
HMGXB4-203ENST00000420166 UBXN2AP68543 259 aa23.89■■□□□ 1.41
HMGXB4-203ENST00000420166 KIAA0100Q14667 2235 aaKnown RBP23.89■■□□□ 1.41
HMGXB4-203ENST00000420166 POTEB2H3BUK9 544 aa23.88■■□□□ 1.41
HMGXB4-203ENST00000420166 CCT2P78371 535 aaKnown RBP23.88■■□□□ 1.41
HMGXB4-203ENST00000420166 CNTN2Q02246 1040 aa23.88■■□□□ 1.41
HMGXB4-203ENST00000420166 TRIM32Q13049 653 aa23.88■■□□□ 1.41
HMGXB4-203ENST00000420166 BAATQ14032 418 aaPredicted RBP23.88■■□□□ 1.41
HMGXB4-203ENST00000420166 FAM133AQ8N9E0 248 aa23.88■■□□□ 1.41
HMGXB4-203ENST00000420166 RGS22Q8NE09 1264 aa23.88■■□□□ 1.41
HMGXB4-203ENST00000420166 FGD4Q96M96 766 aa23.88■■□□□ 1.41
HMGXB4-203ENST00000420166 NCOA5Q9HCD5 579 aaKnown RBP23.88■■□□□ 1.41
HMGXB4-203ENST00000420166 TPCN1Q9ULQ1 816 aa23.88■■□□□ 1.41
HMGXB4-203ENST00000420166 hCG_1642624A0A1W2PR95 340 aa23.87■■□□□ 1.41
HMGXB4-203ENST00000420166 PTPDC1A2A3K4 754 aa23.87■■□□□ 1.41
HMGXB4-203ENST00000420166 MFSD14CQ5VZR4 134 aa23.87■■□□□ 1.41
HMGXB4-203ENST00000420166 SLC30A10Q6XR72 485 aa23.87■■□□□ 1.41
HMGXB4-203ENST00000420166 RNF207Q6ZRF8 634 aa23.87■■□□□ 1.41
HMGXB4-203ENST00000420166 MAF1Q9H063 256 aa23.87■■□□□ 1.41
HMGXB4-203ENST00000420166 OPLAHO14841 1288 aa23.86■■□□□ 1.41
HMGXB4-203ENST00000420166 STK3Q13188 491 aa23.86■■□□□ 1.41
HMGXB4-203ENST00000420166 MAP3K21Q5TCX8 1036 aa23.86■■□□□ 1.41
HMGXB4-203ENST00000420166 ZNF467Q7Z7K2 595 aaPredicted RBP23.86■■□□□ 1.41
HMGXB4-203ENST00000420166 MCF2L2Q86YR7 1114 aa23.86■■□□□ 1.41
HMGXB4-203ENST00000420166 CENPFP49454 3210 aa23.86■■□□□ 1.41
HMGXB4-203ENST00000420166 MYCP01106 439 aaPredicted RBP23.85■■□□□ 1.41
HMGXB4-203ENST00000420166 PRKAR2AP13861 404 aaKnown RBP23.85■■□□□ 1.41
HMGXB4-203ENST00000420166 CYP2C19P33261 490 aa23.85■■□□□ 1.41
HMGXB4-203ENST00000420166 RPS6P62753 249 aaKnown RBP23.85■■□□□ 1.41
HMGXB4-203ENST00000420166 RABEP1Q15276 862 aa23.85■■□□□ 1.41
HMGXB4-203ENST00000420166 MTFR1Q15390 333 aa23.85■■□□□ 1.41
HMGXB4-203ENST00000420166 NTRK3Q16288 839 aa23.85■■□□□ 1.41
HMGXB4-203ENST00000420166 NOL8Q76FK4 1167 aaKnown RBP23.85■■□□□ 1.41
HMGXB4-203ENST00000420166 V9GY48 417 aaPredicted RBP23.85■■□□□ 1.41
HMGXB4-203ENST00000420166 SOWAHBA6NEL2 793 aa23.84■■□□□ 1.41
HMGXB4-203ENST00000420166 IFNAR1P17181 557 aa23.84■■□□□ 1.41
HMGXB4-203ENST00000420166 CALML3P27482 149 aa23.84■■□□□ 1.41
HMGXB4-203ENST00000420166 CACNB2Q08289 660 aaPredicted RBP23.84■■□□□ 1.41
HMGXB4-203ENST00000420166 MSL3Q8N5Y2 521 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms