RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 WNT8AQ9H1J5 351 aa16.98■□□□□ 0.31
NFE4-201ENST00000420058 NKX2-4Q9H2Z4 354 aa16.98■□□□□ 0.31
NFE4-201ENST00000420058 TLR3O15455 904 aaKnown RBP16.97■□□□□ 0.31
NFE4-201ENST00000420058 ITGA7Q13683 1181 aa16.97■□□□□ 0.31
NFE4-201ENST00000420058 CCDC85BQ15834 202 aaPredicted RBP16.97■□□□□ 0.31
NFE4-201ENST00000420058 C20orf194Q5TEA3 1177 aa16.97■□□□□ 0.31
NFE4-201ENST00000420058 HIPK3Q9H422 1215 aa16.97■□□□□ 0.31
NFE4-201ENST00000420058 ACAD9Q9H845 621 aa16.97■□□□□ 0.31
NFE4-201ENST00000420058 CTDP1Q9Y5B0 961 aaPredicted RBP16.97■□□□□ 0.31
NFE4-201ENST00000420058 MYH4Q9Y623 1939 aa16.97■□□□□ 0.31
NFE4-201ENST00000420058 DYNC1LI2O43237 492 aaPredicted RBP16.96■□□□□ 0.31
NFE4-201ENST00000420058 PLA2G6O60733 806 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 CABYRO75952 493 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 FDX1P10109 184 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 MYOGP15173 224 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 RABGGTBP53611 331 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 CCL23P55773 120 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 RAB30Q15771 203 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 FSCN1Q16658 493 aaKnown RBP16.96■□□□□ 0.31
NFE4-201ENST00000420058 MUM1L1Q5H9M0 696 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 OTOP2Q7RTS6 562 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 TLK2Q86UE8 772 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 STAG1Q8WVM7 1258 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 GMCL1Q96IK5 515 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 PURBQ96QR8 312 aaKnown RBP16.96■□□□□ 0.31
NFE4-201ENST00000420058 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
NFE4-201ENST00000420058 RNF146Q9NTX7 359 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 THEGQ9P2T0 379 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 MSRAQ9UJ68 235 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 PLIN4Q96Q06 1357 aa16.96■□□□□ 0.31
NFE4-201ENST00000420058 PRRC2BQ5JSZ5 2229 aaKnown RBP16.95■□□□□ 0.3
NFE4-201ENST00000420058 ASB14A6NK59 587 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 B4GALT4O60513 344 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 GNAT2P19087 354 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 MCCP23508 829 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 TDO2P48775 406 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 SNAP25P60880 206 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 PSMC6P62333 389 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 MRPS5P82675 430 aaKnown RBP16.95■□□□□ 0.3
NFE4-201ENST00000420058 TFAP4Q01664 338 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 IQSEC1Q6DN90 963 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 NOL8Q76FK4 1167 aaKnown RBP16.95■□□□□ 0.3
NFE4-201ENST00000420058 ADAMTS19Q8TE59 1207 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 MORC4Q8TE76 937 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 TRERF1Q96PN7 1200 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 DCTPP1Q9H773 170 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 INCENPQ9NQS7 918 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
NFE4-201ENST00000420058 FOXP2O15409 715 aa16.94■□□□□ 0.3
NFE4-201ENST00000420058 ZFYP08048 801 aaPredicted RBP16.94■□□□□ 0.3
NFE4-201ENST00000420058 IGFBP4P22692 258 aa16.94■□□□□ 0.3
NFE4-201ENST00000420058 STAT2P52630 851 aa16.94■□□□□ 0.3
NFE4-201ENST00000420058 TKFCQ3LXA3 575 aa16.94■□□□□ 0.3
NFE4-201ENST00000420058 RASGRP2Q7LDG7 609 aa16.94■□□□□ 0.3
NFE4-201ENST00000420058 CHURC1Q8WUH1 139 aa16.94■□□□□ 0.3
NFE4-201ENST00000420058 SLC28A3Q9HAS3 691 aa16.94■□□□□ 0.3
NFE4-201ENST00000420058 ZNF287Q9HBT7 754 aa16.94■□□□□ 0.3
NFE4-201ENST00000420058 CYP39A1Q9NYL5 469 aa16.94■□□□□ 0.3
NFE4-201ENST00000420058 Q9Y3F1 56 aa16.94■□□□□ 0.3
NFE4-201ENST00000420058 APPP05067 770 aa16.93■□□□□ 0.3
NFE4-201ENST00000420058 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
NFE4-201ENST00000420058 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
NFE4-201ENST00000420058 ALAS1P13196 640 aa16.93■□□□□ 0.3
NFE4-201ENST00000420058 BMP1P13497 986 aa16.93■□□□□ 0.3
NFE4-201ENST00000420058 RCSD1Q6JBY9 416 aa16.93■□□□□ 0.3
NFE4-201ENST00000420058 KCTD1Q719H9 257 aa16.93■□□□□ 0.3
NFE4-201ENST00000420058 EEPD1Q7L9B9 569 aa16.93■□□□□ 0.3
NFE4-201ENST00000420058 FAM160B2Q86V87 743 aa16.93■□□□□ 0.3
NFE4-201ENST00000420058 FBXO16Q8IX29 292 aaPredicted RBP16.93■□□□□ 0.3
NFE4-201ENST00000420058 SCLYQ96I15 445 aa16.93■□□□□ 0.3
NFE4-201ENST00000420058 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.93■□□□□ 0.3
NFE4-201ENST00000420058 NMT2O60551 498 aa16.92■□□□□ 0.3
NFE4-201ENST00000420058 SLC1A4P43007 532 aa16.92■□□□□ 0.3
NFE4-201ENST00000420058 NOVP48745 357 aa16.92■□□□□ 0.3
NFE4-201ENST00000420058 PPARAQ07869 468 aa16.92■□□□□ 0.3
NFE4-201ENST00000420058 UHRF1Q96T88 793 aaPredicted RBP16.92■□□□□ 0.3
NFE4-201ENST00000420058 SEZ6LQ9BYH1 1024 aa16.92■□□□□ 0.3
NFE4-201ENST00000420058 AP5M1Q9H0R1 490 aa16.92■□□□□ 0.3
NFE4-201ENST00000420058 ALDH8A1Q9H2A2 487 aaPredicted RBP16.92■□□□□ 0.3
NFE4-201ENST00000420058 CHMP4BQ9H444 224 aaKnown RBP16.92■□□□□ 0.3
NFE4-201ENST00000420058 PRR12Q9ULL5 1215 aa16.92■□□□□ 0.3
NFE4-201ENST00000420058 GBF1Q92538 1859 aa16.92■□□□□ 0.3
NFE4-201ENST00000420058 TTLL4Q14679 1199 aa16.91■□□□□ 0.3
NFE4-201ENST00000420058 NECAB3Q96P71 396 aaPredicted RBP16.91■□□□□ 0.3
NFE4-201ENST00000420058 TRMT13Q9NUP7 481 aaKnown RBP16.91■□□□□ 0.3
NFE4-201ENST00000420058 PCDHA11Q9Y5I1 949 aa16.91■□□□□ 0.3
NFE4-201ENST00000420058 SLC4A7Q9Y6M7 1214 aa16.91■□□□□ 0.3
NFE4-201ENST00000420058 RFXAPO00287 272 aa16.9■□□□□ 0.3
NFE4-201ENST00000420058 CYP2C9P11712 490 aa16.9■□□□□ 0.3
NFE4-201ENST00000420058 PDE4BQ07343 736 aa16.9■□□□□ 0.3
NFE4-201ENST00000420058 DUSP28Q4G0W2 176 aa16.9■□□□□ 0.3
NFE4-201ENST00000420058 ZMYM1Q5SVZ6 1142 aa16.9■□□□□ 0.3
NFE4-201ENST00000420058 KIAA1211Q6ZU35 1233 aa16.9■□□□□ 0.3
NFE4-201ENST00000420058 RPUSD2Q8IZ73 545 aaKnown RBP16.9■□□□□ 0.3
NFE4-201ENST00000420058 PI4K2BQ8TCG2 481 aa16.9■□□□□ 0.3
NFE4-201ENST00000420058 MTIF3Q9H2K0 278 aaKnown RBP16.9■□□□□ 0.3
NFE4-201ENST00000420058 VTA1Q9NP79 307 aa16.9■□□□□ 0.3
NFE4-201ENST00000420058 LCTP09848 1927 aa16.9■□□□□ 0.3
NFE4-201ENST00000420058 TCF20Q9UGU0 1960 aaKnown RBP16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms