RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 VPS53Q5VIR6 699 aa16.38■□□□□ 0.21
NOD1-205ENST00000419799 GIMAP6Q6P9H5 292 aa16.38■□□□□ 0.21
NOD1-205ENST00000419799 FGD4Q96M96 766 aa16.38■□□□□ 0.21
NOD1-205ENST00000419799 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.38■□□□□ 0.21
NOD1-205ENST00000419799 BAZ2AQ9UIF9 1905 aaKnown RBP16.38■□□□□ 0.21
NOD1-205ENST00000419799 ARMCX2Q7L311 632 aa16.37■□□□□ 0.21
NOD1-205ENST00000419799 NUP88Q99567 741 aaPredicted RBP16.37■□□□□ 0.21
NOD1-205ENST00000419799 SEZ6LQ9BYH1 1024 aa16.37■□□□□ 0.21
NOD1-205ENST00000419799 KATNBL1Q9H079 304 aa16.37■□□□□ 0.21
NOD1-205ENST00000419799 HIPK3Q9H422 1215 aa16.37■□□□□ 0.21
NOD1-205ENST00000419799 NYAP2Q9P242 653 aa16.37■□□□□ 0.21
NOD1-205ENST00000419799 FBXO40Q9UH90 709 aa16.37■□□□□ 0.21
NOD1-205ENST00000419799 F5H6K3 240 aa16.36■□□□□ 0.21
NOD1-205ENST00000419799 ZBED4O75132 1171 aa16.36■□□□□ 0.21
NOD1-205ENST00000419799 CABYRO75952 493 aa16.36■□□□□ 0.21
NOD1-205ENST00000419799 KLRC3Q07444 240 aa16.36■□□□□ 0.21
NOD1-205ENST00000419799 OTOP2Q7RTS6 562 aa16.36■□□□□ 0.21
NOD1-205ENST00000419799 CPXCR1Q8N123 301 aa16.36■□□□□ 0.21
NOD1-205ENST00000419799 ANKRD35Q8N283 1001 aa16.36■□□□□ 0.21
NOD1-205ENST00000419799 CHST13Q8NET6 341 aa16.36■□□□□ 0.21
NOD1-205ENST00000419799 NECAB3Q96P71 396 aaPredicted RBP16.36■□□□□ 0.21
NOD1-205ENST00000419799 OSBPL3Q9H4L5 887 aa16.36■□□□□ 0.21
NOD1-205ENST00000419799 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
NOD1-205ENST00000419799 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
NOD1-205ENST00000419799 FOXP2O15409 715 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 SDSP20132 328 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 RASA1P20936 1047 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 OAZ1P54368 228 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 CTDSPL2Q05D32 466 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 PPARAQ07869 468 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 MCMDC2Q4G0Z9 681 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 PPP2R2DQ66LE6 453 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
NOD1-205ENST00000419799 CCDC144CPQ8IYA2 1237 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 SLC38A10Q9HBR0 1119 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 PCDHA11Q9Y5I1 949 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 UMODL1Q5DID0 1318 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 GBF1Q92538 1859 aa16.35■□□□□ 0.21
NOD1-205ENST00000419799 CHD9Q3L8U1 2897 aa16.34■□□□□ 0.21
NOD1-205ENST00000419799 NDUFB10O96000 172 aa16.34■□□□□ 0.21
NOD1-205ENST00000419799 POU3F3P20264 500 aaPredicted RBP16.34■□□□□ 0.21
NOD1-205ENST00000419799 BEX3Q00994 111 aa16.34■□□□□ 0.21
NOD1-205ENST00000419799 TNFAIP2Q03169 654 aa16.34■□□□□ 0.21
NOD1-205ENST00000419799 ITGA7Q13683 1181 aa16.34■□□□□ 0.21
NOD1-205ENST00000419799 CXCL17Q6UXB2 119 aa16.34■□□□□ 0.21
NOD1-205ENST00000419799 RPUSD2Q8IZ73 545 aaKnown RBP16.34■□□□□ 0.21
NOD1-205ENST00000419799 ZNF444Q8N0Y2 327 aaPredicted RBP16.34■□□□□ 0.21
NOD1-205ENST00000419799 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
NOD1-205ENST00000419799 INCENPQ9NQS7 918 aa16.34■□□□□ 0.21
NOD1-205ENST00000419799 GNEQ9Y223 722 aaKnown RBP16.34■□□□□ 0.21
NOD1-205ENST00000419799 CTDP1Q9Y5B0 961 aaPredicted RBP16.34■□□□□ 0.21
NOD1-205ENST00000419799 SLC4A7Q9Y6M7 1214 aa16.34■□□□□ 0.21
NOD1-205ENST00000419799 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
NOD1-205ENST00000419799 SLC4A3P48751 1232 aa16.33■□□□□ 0.2
NOD1-205ENST00000419799 RABGGTBP53611 331 aa16.33■□□□□ 0.2
NOD1-205ENST00000419799 TFF2Q03403 129 aa16.33■□□□□ 0.2
NOD1-205ENST00000419799 CWC27Q6UX04 472 aaKnown RBP16.33■□□□□ 0.2
NOD1-205ENST00000419799 NOC4LQ9BVI4 516 aaKnown RBP16.33■□□□□ 0.2
NOD1-205ENST00000419799 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
NOD1-205ENST00000419799 DIAPH3Q9NSV4 1193 aa16.33■□□□□ 0.2
NOD1-205ENST00000419799 ASTN1O14525 1302 aa16.33■□□□□ 0.2
NOD1-205ENST00000419799 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.32■□□□□ 0.2
NOD1-205ENST00000419799 GRIN2DO15399 1336 aa16.32■□□□□ 0.2
NOD1-205ENST00000419799 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
NOD1-205ENST00000419799 MYOGP15173 224 aa16.32■□□□□ 0.2
NOD1-205ENST00000419799 CCL23P55773 120 aa16.32■□□□□ 0.2
NOD1-205ENST00000419799 PDE4BQ07343 736 aa16.32■□□□□ 0.2
NOD1-205ENST00000419799 TLK2Q86UE8 772 aa16.32■□□□□ 0.2
NOD1-205ENST00000419799 MICALL1Q8N3F8 863 aa16.32■□□□□ 0.2
NOD1-205ENST00000419799 FAM133AQ8N9E0 248 aa16.32■□□□□ 0.2
NOD1-205ENST00000419799 KIFC2Q96AC6 838 aa16.32■□□□□ 0.2
NOD1-205ENST00000419799 FEM1BQ9UK73 627 aa16.32■□□□□ 0.2
NOD1-205ENST00000419799 SYNPO2Q9UMS6 1093 aa16.32■□□□□ 0.2
NOD1-205ENST00000419799 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 ZEB2O60315 1214 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 B4GALT4O60513 344 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 PFKMP08237 780 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 FDX1P10109 184 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 HSPD1P10809 573 aaKnown RBP16.31■□□□□ 0.2
NOD1-205ENST00000419799 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
NOD1-205ENST00000419799 KCNQ1P51787 676 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 CNTN2Q02246 1040 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 FSCN1Q16658 493 aaKnown RBP16.31■□□□□ 0.2
NOD1-205ENST00000419799 TTC22Q5TAA0 569 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
NOD1-205ENST00000419799 MKL1Q969V6 931 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 CHMP4CQ96CF2 233 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 VWCEQ96DN2 955 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 ZNF287Q9HBT7 754 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 CLIP2Q9UDT6 1046 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 Q9Y3F1 56 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 HCN4Q9Y3Q4 1203 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 MCM3APO60318 1980 aa16.31■□□□□ 0.2
NOD1-205ENST00000419799 IGKV6D-41A0A0C4DH26 115 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 ASB14A6NK59 587 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 TSPY3P0CV98 308 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 TSPY8P0CW00 308 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 ATP2A2P16615 1042 aaKnown RBP16.3■□□□□ 0.2
NOD1-205ENST00000419799 HAND2P61296 217 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 TFAP4Q01664 338 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms