RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 LCHNA4D1U4 455 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 PDE6AP16499 860 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 KCNA5P22460 613 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 PTGS1P23219 599 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 OAZ1P54368 228 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 ERVK-21P61565 698 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 FOXK2Q01167 660 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 PTCRAQ6ISU1 281 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 C16orf86Q6ZW13 317 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 LCORLQ8N3X6 602 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 CCDC8Q9H0W5 538 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 SUGCTQ9HAC7 445 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 SLC38A10Q9HBR0 1119 aa12.66□□□□□ -0.38
RAPGEF1-205ENST00000419442 TECTAO75443 2155 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 TCRBV5S4A2TA0A5A2 114 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 DYNC1LI2O43237 492 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 IQCF3P0C7M6 154 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 CNTN2Q02246 1040 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 C12orf60Q5U649 245 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 IQSEC1Q6DN90 963 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 TAPT1Q6NXT6 567 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 HFE2Q6ZVN8 426 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 NOL8Q76FK4 1167 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 FAM9BQ8IZU0 186 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 CPXCR1Q8N123 301 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 NUP88Q99567 741 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 ATP8A2Q9NTI2 1148 aa12.65□□□□□ -0.38
RAPGEF1-205ENST00000419442 SOWAHBA6NEL2 793 aa12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 ASB14A6NK59 587 aa12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 ZBED4O75132 1171 aa12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 SURF6O75683 361 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 NDUFB10O96000 172 aa12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 ZP2Q05996 745 aa12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 OS9Q13438 667 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 SLC9C2Q5TAH2 1124 aa12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 ANKS1AQ92625 1134 aa12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 MFSD14AQ96MC6 490 aa12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 RAVER2Q9HCJ3 691 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 PRKAG3Q9UGI9 489 aa12.64□□□□□ -0.39
RAPGEF1-205ENST00000419442 ZNF532Q9HCE3 1301 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 KMT2EQ8IZD2 1858 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 MYH7P12883 1935 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 F5H6K3 240 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 WDR5P61964 334 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 ATP8B2P98198 1209 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 KLRC3Q07444 240 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 COL19A1Q14993 1142 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 TMEM63BQ5T3F8 832 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 PRSS33Q8NF86 280 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 TGS1Q96RS0 853 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 PDGFCQ9NRA1 345 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 POLR3EQ9NVU0 708 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 NYAP2Q9P242 653 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 ZDBF2Q9HCK1 2354 aa12.63□□□□□ -0.39
RAPGEF1-205ENST00000419442 ZBED9Q6R2W3 1325 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 WDFY4Q6ZS81 3184 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 CYP2D7A0A087X1C5 515 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 PRKAB2O43741 272 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 KCNJ6P48051 423 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 PURAQ00577 322 aaKnown RBP12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 GPNMBQ14956 572 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 BMP8AQ7Z5Y6 402 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 MORC4Q8TE76 937 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 FTOQ9C0B1 505 aaKnown RBP eCLIP12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 ACAD9Q9H845 621 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 A1CFQ9NQ94 594 aaKnown RBP12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 CACNA1AO00555 2505 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
RAPGEF1-205ENST00000419442 LINC01553A4QN01 128 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 USP17L12C9JPN9 530 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 USP17L21D6R901 530 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 RAD21O60216 631 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 GJB5O95377 273 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 FDX1P10109 184 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 PTPN5P54829 565 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 PTPN11Q06124 597 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 LRRFIP1Q32MZ4 808 aaKnown RBP12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 DUSP28Q4G0W2 176 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 RETREG2Q8NC44 543 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 MTG1Q9BT17 334 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 ARMT1Q9H993 441 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 VTA1Q9NP79 307 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 FEM1BQ9UK73 627 aa12.61□□□□□ -0.39
RAPGEF1-205ENST00000419442 TRIM27P14373 513 aa12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 DEFB103AP81534 67 aa12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 BFSP2Q13515 415 aa12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 HERC4Q5GLZ8 1057 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 NFRKBQ6P4R8 1299 aa12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 TMCO2Q7Z6W1 182 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 ADHFE1Q8IWW8 467 aa12.6□□□□□ -0.39
RAPGEF1-205ENST00000419442 FBXO16Q8IX29 292 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms