RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 VGLL4Q14135 290 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 GSE1Q14687 1217 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 FOXD4L6Q3SYB3 417 aaPredicted RBP11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 KIAA1755Q5JYT7 1200 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 KANK3Q6NY19 840 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 FOXD4L3Q6VB84 417 aaPredicted RBP11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 LBX2Q6XYB7 198 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 CCDC73Q6ZRK6 1079 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 PIK3AP1Q6ZUJ8 805 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 KCTD17Q8N5Z5 321 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 ENGASEQ8NFI3 743 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 GTF3C2Q8WUA4 911 aaPredicted RBP11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 MRPS27Q92552 414 aaKnown RBP11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 AK8Q96MA6 479 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 GDPD2Q9HCC8 539 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 SLC45A1Q9Y2W3 748 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 DOCK1Q14185 1865 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 MYH6P13533 1939 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 A0A0G2JLL6 359 aaPredicted RBP11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 ADM5C9JUS6 153 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 MEIS2O14770 477 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 TBX3O15119 743 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 RAD21O60216 631 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 CYP3A4P08684 503 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 DSG3P32926 999 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 CIITAP33076 1130 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 COPB2P35606 906 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 PDIA5Q14554 519 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 RESP18Q5W5W9 173 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 RBM43Q6ZSC3 357 aaKnown RBP11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 PRRT2Q7Z6L0 340 aaPredicted RBP11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 CCAR1Q8IX12 1150 aaKnown RBP11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 SPICE1Q8N0Z3 855 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 C4orf32Q8N8J7 132 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 COA7Q96BR5 231 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 MBOAT7Q96N66 472 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 CPVLQ9H3G5 476 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 FAM13BQ9NYF5 915 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 HOOK1Q9UJC3 728 aaKnown RBP11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 FBXO2Q9UK22 296 aaPredicted RBP11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 HPSEQ9Y251 543 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 PCDHB6Q9Y5E3 794 aa11.51□□□□□ -0.57
HMGA1P6-201ENST00000418454 GCOM1H8Y6P7 765 aaPredicted RBP11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 IRF6O14896 467 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 POLR2MP0CAP2 368 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 PTGDRQ13258 359 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 SNW1Q13573 536 aaKnown RBP11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 EAPPQ56P03 285 aaPredicted RBP11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 PRAMEF18Q5VWM3 479 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 CAVIN1Q6NZI2 390 aaKnown RBP11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 XRRA1Q6P2D8 792 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 FMR1NBQ8N0W7 255 aaPredicted RBP11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 CRYGNQ8WXF5 182 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 PIBF1Q8WXW3 757 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 KIFC2Q96AC6 838 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 NUP88Q99567 741 aaPredicted RBP11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 GLIS2Q9BZE0 524 aaPredicted RBP11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 RAB34Q9BZG1 259 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 RPAP3Q9H6T3 665 aaPredicted RBP11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 MYH15Q9Y2K3 1946 aa11.5□□□□□ -0.57
HMGA1P6-201ENST00000418454 ATAD5Q96QE3 1844 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 SPDYE3A6NKU9 549 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 VWA5AO00534 786 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 KINO60870 393 aaKnown RBP11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 FLOT1O75955 427 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 SREBF1P36956 1147 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 HSD17B4P51659 736 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 CEBPZQ03701 1054 aaKnown RBP11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 ZSCAN23Q3MJ62 389 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 Q4G0T1 1027 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 EARS2Q5JPH6 523 aaKnown RBP11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 DTHD1Q6ZMT9 781 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 RASGRP2Q7LDG7 609 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 C2orf69Q8N8R5 385 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 TBCKQ8TEA7 893 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 CHAMP1Q96JM3 812 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 RRAGCQ9HB90 399 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 SCAF8Q9UPN6 1271 aaKnown RBP11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 ZNF536O15090 1300 aa11.49□□□□□ -0.57
HMGA1P6-201ENST00000418454 MYL1P05976 194 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 ZBTB48P10074 688 aaPredicted RBP11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 FXR2P51116 673 aaKnown RBP eCLIP11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 ZNF174Q15697 407 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 LRSAM1Q6UWE0 723 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 SLFN12Q8IYM2 578 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 FSIP1Q8NA03 581 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 CHST13Q8NET6 341 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 SLC10A4Q96EP9 437 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 FAM20AQ96MK3 541 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 MTMR9Q96QG7 549 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 TANGO6Q9C0B7 1094 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 NUP62CLQ9H1M0 184 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 CLSTN2Q9H4D0 955 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 DACT1Q9NYF0 836 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 TMEM63CQ9P1W3 806 aa11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 BIN2Q9UBW5 565 aaPredicted RBP11.48□□□□□ -0.57
HMGA1P6-201ENST00000418454 PAPPA2Q9BXP8 1791 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms