RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 INO80BQ9C086 356 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-205ENST00000418258 CBX8Q9HC52 389 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 MED23Q9ULK4 1368 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 KCNK3O14649 394 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 DTNBO60941 627 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 TBC1D10BQ4KMP7 808 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-205ENST00000418258 MICAL1Q8TDZ2 1067 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 BZW2Q9Y6E2 419 aaKnown RBP12.28□□□□□ -0.44
PTCH1-205ENST00000418258 ATP5JP18859 108 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 CCND2P30279 289 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 CAPN12Q6ZSI9 719 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 RAPH1Q70E73 1250 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 DBNDD1Q9H9R9 158 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 HNRNPDLO14979 420 aaKnown RBP12.28□□□□□ -0.44
PTCH1-205ENST00000418258 EIF4A1P60842 406 aaKnown RBP12.28□□□□□ -0.44
PTCH1-205ENST00000418258 MTMR3Q13615 1198 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 RABEP2Q9H5N1 569 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 LARSQ9P2J5 1176 aaKnown RBP12.28□□□□□ -0.44
PTCH1-205ENST00000418258 SLC12A6Q9UHW9 1150 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 HEXIM1O94992 359 aaKnown RBP12.27□□□□□ -0.44
PTCH1-205ENST00000418258 EDC3Q96F86 508 aaKnown RBP12.27□□□□□ -0.44
PTCH1-205ENST00000418258 WDR17Q8IZU2 1322 aa12.27□□□□□ -0.44
PTCH1-205ENST00000418258 DNMT1P26358 1616 aaKnown RBP12.27□□□□□ -0.44
PTCH1-205ENST00000418258 STAT2P52630 851 aa12.27□□□□□ -0.44
PTCH1-205ENST00000418258 PPFIA1Q13136 1202 aa12.27□□□□□ -0.44
PTCH1-205ENST00000418258 ADAT2Q7Z6V5 191 aaKnown RBP12.27□□□□□ -0.44
PTCH1-205ENST00000418258 HDAC11Q96DB2 347 aa12.27□□□□□ -0.44
PTCH1-205ENST00000418258 SMYD2Q9NRG4 433 aa12.27□□□□□ -0.44
PTCH1-205ENST00000418258 SERTAD1Q9UHV2 236 aa12.27□□□□□ -0.44
PTCH1-205ENST00000418258 MLH3Q9UHC1 1453 aa12.27□□□□□ -0.44
PTCH1-205ENST00000418258 RAD17O75943 681 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 TTLL1O95922 423 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 ADAMTS12P58397 1594 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 KRIT1O00522 736 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 BUB1BO60566 1050 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-205ENST00000418258 PHKG2P15735 406 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 MAD1L1Q9Y6D9 718 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 ZMYM6O95789 1325 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 USP14P54578 494 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 UBXN2AP68543 259 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 EXOC8Q8IYI6 725 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 BBS5Q8N3I7 341 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 PI4K2BQ8TCG2 481 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 EFCC1Q9HA90 598 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 DDX41Q9UJV9 622 aaKnown RBP12.27□□□□□ -0.45
PTCH1-205ENST00000418258 SCG2P13521 617 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 BAG5Q9UL15 447 aa12.27□□□□□ -0.45
PTCH1-205ENST00000418258 ZNF215Q9UL58 517 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-205ENST00000418258 CHL1O00533 1208 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 KRT33BQ14525 404 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 ANKRD42Q8N9B4 389 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 GANCQ8TET4 914 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 CARD6Q9BX69 1037 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 H7C0C1 242 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 ATP5OP48047 213 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 ADKP55263 362 aaKnown RBP12.26□□□□□ -0.45
PTCH1-205ENST00000418258 C1orf228Q6PIY5 440 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 KRBA2Q6ZNG9 492 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 TAB3Q8N5C8 712 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-205ENST00000418258 MAP3K15Q6ZN16 1313 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 RGS16O15492 202 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-205ENST00000418258 ARHGAP4P98171 946 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 GALNT17Q6IS24 598 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 PHLDB2Q86SQ0 1253 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 HVCN1Q96D96 273 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 IQCDQ96DY2 449 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 OLA1Q9NTK5 396 aaKnown RBP12.26□□□□□ -0.45
PTCH1-205ENST00000418258 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-205ENST00000418258 PDE6AP16499 860 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 DALRD3Q5D0E6 543 aaKnown RBP12.26□□□□□ -0.45
PTCH1-205ENST00000418258 NOSTRINQ8IVI9 506 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 SLC7A3Q8WY07 619 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 ZBED2Q9BTP6 218 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 SLC39A2Q9NP94 309 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 KIAA1024Q9UPX6 916 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 KRT71Q3SY84 523 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 ODR4Q5SWX8 454 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-205ENST00000418258 ANGPTL3Q9Y5C1 460 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 TNKSO95271 1327 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 IREB2P48200 963 aaKnown RBP12.26□□□□□ -0.45
PTCH1-205ENST00000418258 GUCY2FP51841 1108 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 EEPD1Q7L9B9 569 aa12.26□□□□□ -0.45
PTCH1-205ENST00000418258 THAP12O43422 761 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 BUB1O43683 1085 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 CASP2P42575 452 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 FANCBQ8NB91 859 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 CACTINQ8WUQ7 758 aaKnown RBP12.25□□□□□ -0.45
PTCH1-205ENST00000418258 GREM2Q9H772 168 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 BCAP29Q9UHQ4 241 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 MYL7Q01449 175 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 JADE1Q6IE81 842 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 C10orf67Q8IYJ2 551 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 ATP6V0A1Q93050 837 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 SGK1O00141 431 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 CLGNO14967 610 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 TROVE2P10155 538 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTCH1-205ENST00000418258 GARSP41250 739 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms