RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 CDC25AP30304 524 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 SLC8A3P57103 927 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 EIF4A1P60842 406 aaKnown RBP13.17□□□□□ -0.3
UBR4-205ENST00000417040 PPM1KQ8N3J5 372 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 IFT122Q9HBG6 1241 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 RTEL1Q9NZ71 1219 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 DDX25Q9UHL0 483 aaKnown RBP13.17□□□□□ -0.3
UBR4-205ENST00000417040 DENND4BO75064 1496 aaPredicted RBP13.17□□□□□ -0.3
UBR4-205ENST00000417040 A2MP01023 1474 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 A0A087WUV0 522 aaPredicted RBP13.17□□□□□ -0.3
UBR4-205ENST00000417040 SGK1O00141 431 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 PDE6CP51160 858 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 PRKG1Q13976 671 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 TERF2Q15554 542 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 NHEJ1Q9H9Q4 299 aaPredicted RBP13.17□□□□□ -0.3
UBR4-205ENST00000417040 USP27XA6NNY8 438 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 CTNND1O60716 968 aaKnown RBP13.17□□□□□ -0.3
UBR4-205ENST00000417040 BCAMP50895 628 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 FIS1Q9Y3D6 152 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 ATP1A3P13637 1013 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 CYP4F22Q6NT55 531 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 FAM133AQ8N9E0 248 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 PIP4K2CQ8TBX8 421 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 MAGOHBQ96A72 148 aaKnown RBP13.17□□□□□ -0.3
UBR4-205ENST00000417040 GUCY2CP25092 1073 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 YWHAGP61981 247 aaKnown RBP eCLIP13.17□□□□□ -0.3
UBR4-205ENST00000417040 MMEL1Q495T6 779 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 TBC1D1Q86TI0 1168 aaPredicted RBP13.17□□□□□ -0.3
UBR4-205ENST00000417040 CCDC127Q96BQ5 260 aa13.17□□□□□ -0.3
UBR4-205ENST00000417040 ARMCX3Q9UH62 379 aaPredicted RBP13.17□□□□□ -0.3
UBR4-205ENST00000417040 TNKSO95271 1327 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 OR52Z1P0C646 297 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 CCDC93Q567U6 631 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 GJA10Q969M2 543 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 C8orf37Q96NL8 207 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 EYA3Q99504 573 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 ADORA1P30542 326 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 G3BP2Q9UN86 482 aaKnown RBP13.16□□□□□ -0.3
UBR4-205ENST00000417040 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 IL9RQ01113 521 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 DHX9Q08211 1270 aaKnown RBP13.16□□□□□ -0.3
UBR4-205ENST00000417040 BFSP1Q12934 665 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
UBR4-205ENST00000417040 KLHL29Q96CT2 875 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 PCDHA12Q9UN75 941 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 PASKQ96RG2 1323 aa13.16□□□□□ -0.3
UBR4-205ENST00000417040 GYG1P46976 350 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.15□□□□□ -0.3
UBR4-205ENST00000417040 KAT6BQ8WYB5 2073 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 NOP56O00567 594 aaKnown RBP13.15□□□□□ -0.3
UBR4-205ENST00000417040 CYP4A11Q02928 519 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 HIBCHQ6NVY1 386 aaPredicted RBP13.15□□□□□ -0.3
UBR4-205ENST00000417040 TRIML1Q8N9V2 468 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 NFU1Q9UMS0 254 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 TMEM232C9JQI7 657 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 GAS7O60861 476 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 NSUN7Q8NE18 718 aaKnown RBP13.15□□□□□ -0.3
UBR4-205ENST00000417040 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 SUDS3Q9H7L9 328 aaPredicted RBP13.15□□□□□ -0.3
UBR4-205ENST00000417040 PZPP20742 1482 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 ITKQ08881 620 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 NSMFQ6X4W1 530 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 CYTH2Q99418 400 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 ANO3Q9BYT9 981 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 Q9H521 79 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 GJA3Q9Y6H8 435 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 MYO1CO00159 1063 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 CLIC2O15247 247 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 H2AFZP0C0S5 128 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 DYNLT1P63172 113 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 EXOC3L4Q17RC7 722 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 H2AFVQ71UI9 128 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 ZCCHC17Q9NP64 241 aaKnown RBP13.15□□□□□ -0.3
UBR4-205ENST00000417040 PCDHA13Q9Y5I0 950 aa13.15□□□□□ -0.3
UBR4-205ENST00000417040 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 LRRN2O75325 713 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 SCG2P13521 617 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 RBBP5Q15291 538 aaKnown RBP13.14□□□□□ -0.31
UBR4-205ENST00000417040 TCP11X2Q5H9J9 407 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 JADE1Q6IE81 842 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
UBR4-205ENST00000417040 NT5C3AQ9H0P0 336 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 TYW1Q9NV66 732 aaKnown RBP13.14□□□□□ -0.31
UBR4-205ENST00000417040 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 HMGXB3Q12766 1538 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 KDM3AQ9Y4C1 1321 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 NR1D1P20393 614 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 IRX4P78413 519 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 ACTN3Q08043 901 aaPredicted RBP13.14□□□□□ -0.31
UBR4-205ENST00000417040 IFRD2Q12894 506 aaPredicted RBP13.14□□□□□ -0.31
UBR4-205ENST00000417040 PDCLQ13371 301 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 LCA5Q86VQ0 697 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 BZW2Q9Y6E2 419 aaKnown RBP13.14□□□□□ -0.31
UBR4-205ENST00000417040 UHRF1BP1Q6BDS2 1440 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 LRGUKQ96M69 825 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms