RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 DYNLL2Q96FJ2 89 aa15.47■□□□□ 0.07
CHEK2-210ENST00000416671 CAPS2Q9BXY5 557 aa15.47■□□□□ 0.07
CHEK2-210ENST00000416671 FOXP1Q9H334 677 aaPredicted RBP15.47■□□□□ 0.07
CHEK2-210ENST00000416671 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHEK2-210ENST00000416671 TSPY2A6NKD2 308 aa15.47■□□□□ 0.07
CHEK2-210ENST00000416671 AGPSO00116 658 aa15.47■□□□□ 0.07
CHEK2-210ENST00000416671 DEFB132Q7Z7B7 95 aa15.47■□□□□ 0.07
CHEK2-210ENST00000416671 RPGRIP1Q96KN7 1286 aa15.47■□□□□ 0.07
CHEK2-210ENST00000416671 MMS19Q96T76 1030 aa15.47■□□□□ 0.07
CHEK2-210ENST00000416671 SELENOOQ9BVL4 669 aa15.47■□□□□ 0.07
CHEK2-210ENST00000416671 RNF26Q9BY78 433 aaPredicted RBP15.47■□□□□ 0.07
CHEK2-210ENST00000416671 GUCA1BQ9UMX6 200 aa15.47■□□□□ 0.07
CHEK2-210ENST00000416671 CEP83Q9Y592 693 aa15.47■□□□□ 0.07
CHEK2-210ENST00000416671 WNT7AO00755 349 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 FGRP09769 529 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 VEGFAP15692 232 aaPredicted RBP15.46■□□□□ 0.07
CHEK2-210ENST00000416671 USP49Q70CQ1 688 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 SH3RF3Q8TEJ3 882 aaPredicted RBP15.46■□□□□ 0.07
CHEK2-210ENST00000416671 NUP88Q99567 741 aaPredicted RBP15.46■□□□□ 0.07
CHEK2-210ENST00000416671 PDGFDQ9GZP0 370 aaPredicted RBP15.46■□□□□ 0.07
CHEK2-210ENST00000416671 MTMR7Q9Y216 660 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 SAR1BQ9Y6B6 198 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 GOLGA6BA6NDN3 693 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 PSMD14O00487 310 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 ENC1O14682 589 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 LDHBP07195 334 aaKnown RBP15.46■□□□□ 0.07
CHEK2-210ENST00000416671 MMP10P09238 476 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 CUL4BQ13620 913 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 GBP6Q6ZN66 633 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 SRBD1Q8N5C6 995 aaKnown RBP15.46■□□□□ 0.07
CHEK2-210ENST00000416671 ZNF579Q8NAF0 562 aaKnown RBP15.46■□□□□ 0.07
CHEK2-210ENST00000416671 ATP8A2Q9NTI2 1148 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 HDAC6Q9UBN7 1215 aa15.46■□□□□ 0.07
CHEK2-210ENST00000416671 CD44P16070 742 aaKnown RBP15.45■□□□□ 0.06
CHEK2-210ENST00000416671 GPSM2P81274 684 aa15.45■□□□□ 0.06
CHEK2-210ENST00000416671 SETQ01105 290 aaPredicted RBP15.45■□□□□ 0.06
CHEK2-210ENST00000416671 RILPL1Q5EBL4 403 aa15.45■□□□□ 0.06
CHEK2-210ENST00000416671 CNPY4Q8N129 248 aa15.45■□□□□ 0.06
CHEK2-210ENST00000416671 DONSONQ9NYP3 566 aa15.45■□□□□ 0.06
CHEK2-210ENST00000416671 CLGNO14967 610 aa15.45■□□□□ 0.06
CHEK2-210ENST00000416671 EIF3HO15372 352 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHEK2-210ENST00000416671 ZMYND10O75800 440 aa15.45■□□□□ 0.06
CHEK2-210ENST00000416671 CCT6AP40227 531 aaKnown RBP15.45■□□□□ 0.06
CHEK2-210ENST00000416671 RCAN1P53805 252 aa15.45■□□□□ 0.06
CHEK2-210ENST00000416671 CKAP4Q07065 602 aaKnown RBP15.45■□□□□ 0.06
CHEK2-210ENST00000416671 CRY2Q49AN0 593 aa15.45■□□□□ 0.06
CHEK2-210ENST00000416671 CAMKK2Q96RR4 588 aa15.45■□□□□ 0.06
CHEK2-210ENST00000416671 CCDC88AQ3V6T2 1871 aa15.45■□□□□ 0.06
CHEK2-210ENST00000416671 ADAMTS3O15072 1205 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 GNGT1P63211 74 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 TRIM14Q14142 442 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 CCNI2Q6ZMN8 369 aaPredicted RBP15.44■□□□□ 0.06
CHEK2-210ENST00000416671 GSPT2Q8IYD1 628 aaKnown RBP15.44■□□□□ 0.06
CHEK2-210ENST00000416671 SLC44A5Q8NCS7 719 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 TGFBRAP1Q8WUH2 860 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 CAPZA3Q96KX2 299 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 ARPP21Q9UBL0 812 aaPredicted RBP15.44■□□□□ 0.06
CHEK2-210ENST00000416671 TRIM10Q9UDY6 481 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 SAP30BPQ9UHR5 308 aaKnown RBP15.44■□□□□ 0.06
CHEK2-210ENST00000416671 EPN1Q9Y6I3 576 aaPredicted RBP15.44■□□□□ 0.06
CHEK2-210ENST00000416671 XDHP47989 1333 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 PDS5AQ29RF7 1337 aaKnown RBP15.44■□□□□ 0.06
CHEK2-210ENST00000416671 N4BP3O15049 544 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 ATP1A1P05023 1023 aaKnown RBP15.44■□□□□ 0.06
CHEK2-210ENST00000416671 TMTC3Q6ZXV5 915 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 RPAINQ86UA6 219 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 PHF20Q9BVI0 1012 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 EHD4Q9H223 541 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 HAUS4Q9H6D7 363 aa15.44■□□□□ 0.06
CHEK2-210ENST00000416671 RNF225M0QZC1 329 aaPredicted RBP15.43■□□□□ 0.06
CHEK2-210ENST00000416671 PRPF3O43395 683 aaKnown RBP15.43■□□□□ 0.06
CHEK2-210ENST00000416671 ORC4O43929 436 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 SRGAP2O75044 1071 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 UFL1O94874 794 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 NDUFA10O95299 355 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 MYBL2P10244 700 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 KRT9P35527 623 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 TFAP4Q01664 338 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 NLGN1Q8N2Q7 840 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 PRPF38AQ8NAV1 312 aaKnown RBP15.43■□□□□ 0.06
CHEK2-210ENST00000416671 CSRNP2Q9H175 543 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 RABEP2Q9H5N1 569 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 SRPRBQ9Y5M8 271 aaKnown RBP15.43■□□□□ 0.06
CHEK2-210ENST00000416671 GRIN2DO15399 1336 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 CDC25AP30304 524 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 KRT2P35908 639 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 AFMP43652 599 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 PAPD7Q5XG87 772 aaKnown RBP15.43■□□□□ 0.06
CHEK2-210ENST00000416671 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.43■□□□□ 0.06
CHEK2-210ENST00000416671 MAPKAPK5Q8IW41 473 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 LEMD3Q9Y2U8 911 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 CNTNAP5Q8WYK1 1306 aa15.43■□□□□ 0.06
CHEK2-210ENST00000416671 USP17L3A6NCW0 530 aa15.42■□□□□ 0.06
CHEK2-210ENST00000416671 USP17L4A6NCW7 530 aa15.42■□□□□ 0.06
CHEK2-210ENST00000416671 GOLGA8KD6RF30 607 aa15.42■□□□□ 0.06
CHEK2-210ENST00000416671 KIF1CO43896 1103 aaKnown RBP15.42■□□□□ 0.06
CHEK2-210ENST00000416671 XBP1P17861 261 aa15.42■□□□□ 0.06
CHEK2-210ENST00000416671 KRT31Q15323 416 aa15.42■□□□□ 0.06
CHEK2-210ENST00000416671 SPTY2D1Q68D10 685 aaPredicted RBP15.42■□□□□ 0.06
CHEK2-210ENST00000416671 RCSD1Q6JBY9 416 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms