RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 INHBEP58166 350 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 HERVK_113P62684 666 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 RESTQ13127 1097 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 DEFB115Q30KQ5 88 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 TKFCQ3LXA3 575 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 MCTP2Q6DN12 878 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 SNRNP48Q6IEG0 339 aaKnown RBP9.63□□□□□ -0.87
RBM39-208ENST00000416108 MCF2L2Q86YR7 1114 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 REXO1Q8N1G1 1221 aaKnown RBP9.63□□□□□ -0.87
RBM39-208ENST00000416108 DAGLBQ8NCG7 672 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 BRI3BPQ8WY22 251 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 TNPO1Q92973 898 aaKnown RBP9.63□□□□□ -0.87
RBM39-208ENST00000416108 MS4A4AQ96JQ5 239 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 TEX13BQ9BXU2 312 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 ZMYND12Q9H0C1 365 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 PSTPIP2Q9H939 334 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 EHMT1Q9H9B1 1298 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 RIC8AQ9NPQ8 531 aa9.63□□□□□ -0.87
RBM39-208ENST00000416108 BTBD18B2RXH4 712 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 BTBD19C9JJ37 291 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 PPP1R11O60927 126 aaPredicted RBP9.62□□□□□ -0.87
RBM39-208ENST00000416108 STAT3P40763 770 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 GCLCP48506 637 aaPredicted RBP9.62□□□□□ -0.87
RBM39-208ENST00000416108 KRT85P78386 507 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 MOGSQ13724 837 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 CSPP1Q1MSJ5 1256 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 FOXD4L6Q3SYB3 417 aaPredicted RBP9.62□□□□□ -0.87
RBM39-208ENST00000416108 GPAT2Q6NUI2 795 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 TYW1BQ6NUM6 668 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 FOXD4L3Q6VB84 417 aaPredicted RBP9.62□□□□□ -0.87
RBM39-208ENST00000416108 KRT25Q7Z3Z0 450 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 NOSTRINQ8IVI9 506 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 TEX2Q8IWB9 1127 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 CCAR1Q8IX12 1150 aaKnown RBP9.62□□□□□ -0.87
RBM39-208ENST00000416108 REM2Q8IYK8 340 aaPredicted RBP9.62□□□□□ -0.87
RBM39-208ENST00000416108 AGBL1Q96MI9 1066 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 P2RX7Q99572 595 aaKnown RBP9.62□□□□□ -0.87
RBM39-208ENST00000416108 ZCCHC17Q9NP64 241 aaKnown RBP9.62□□□□□ -0.87
RBM39-208ENST00000416108 HOMER2Q9NSB8 354 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 RNF146Q9NTX7 359 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 ADAMTS5Q9UNA0 930 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 ZDHHC9Q9Y397 364 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 KIAA1217Q5T5P2 1943 aa9.62□□□□□ -0.87
RBM39-208ENST00000416108 SRCAPQ6ZRS2 3230 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 ZNF536O15090 1300 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 TESPA1A2RU30 521 aaPredicted RBP9.61□□□□□ -0.87
RBM39-208ENST00000416108 SPDYE3A6NKU9 549 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 GCOM1H8Y6P7 765 aaPredicted RBP9.61□□□□□ -0.87
RBM39-208ENST00000416108 ATP2A1O14983 1001 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 CFBP00751 764 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 FOSP01100 380 aaPredicted RBP9.61□□□□□ -0.87
RBM39-208ENST00000416108 POLR2MP0CAP2 368 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 U2AF2P26368 475 aaKnown RBP eCLIP9.61□□□□□ -0.875e-8■■■□□ 17
RBM39-208ENST00000416108 CCNA1P78396 465 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 NOGQ13253 232 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 NR5A1Q13285 461 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 AP3B2Q13367 1082 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 TMEM132BQ14DG7 1078 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 NONOQ15233 471 aaKnown RBP eCLIP9.61□□□□□ -0.87
RBM39-208ENST00000416108 TAF1CQ15572 869 aaPredicted RBP9.61□□□□□ -0.87
RBM39-208ENST00000416108 RILPL1Q5EBL4 403 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 JAKMIP3Q5VZ66 844 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 ATL3Q6DD88 541 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 CYP4F22Q6NT55 531 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 LBX2Q6XYB7 198 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 PIK3AP1Q6ZUJ8 805 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 SAMD3Q8N6K7 520 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 CHST13Q8NET6 341 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 OXER1Q8TDS5 423 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 CAPNS2Q96L46 248 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 TRERF1Q96PN7 1200 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 ACAD9Q9H845 621 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 BIN2Q9UBW5 565 aaPredicted RBP9.61□□□□□ -0.87
RBM39-208ENST00000416108 FBXO40Q9UH90 709 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 CFAP45Q9UL16 551 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 RABGAP1Q9Y3P9 1069 aa9.61□□□□□ -0.87
RBM39-208ENST00000416108 LCTP09848 1927 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 RASSF10A6NK89 507 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 KIF28PB7ZC32 967 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 SLC25A27O95847 323 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 CYP2C8P10632 490 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 TAL1P17542 331 aaPredicted RBP9.6□□□□□ -0.87
RBM39-208ENST00000416108 UBE2SQ16763 222 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 WDR78Q5VTH9 848 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 MYSM1Q5VVJ2 828 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 NSMFQ6X4W1 530 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 RNF207Q6ZRF8 634 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 NCAPG2Q86XI2 1143 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 REPS2Q8NFH8 660 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 RASGRP4Q8TDF6 673 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 SHISA4Q96DD7 197 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 NAP1L4Q99733 375 aaKnown RBP9.6□□□□□ -0.87
RBM39-208ENST00000416108 SPATC1LQ9H0A9 340 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 ZFYVE28Q9HCC9 887 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 MAP3K20Q9NYL2 800 aaKnown RBP9.6□□□□□ -0.87
RBM39-208ENST00000416108 ZNF214Q9UL59 606 aaPredicted RBP9.6□□□□□ -0.87
RBM39-208ENST00000416108 PCDHA6Q9UN73 950 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 CEP131Q9UPN4 1083 aa9.6□□□□□ -0.87
RBM39-208ENST00000416108 PCDHA8Q9Y5H6 950 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms