RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 GJA8P48165 433 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 GUCY1B3Q02153 619 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 MAP2K5Q13163 448 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 MTFR1Q15390 333 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 CCDC178Q5BJE1 867 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 FAM83BQ5T0W9 1011 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 CLEC17AQ6ZS10 378 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 FERMT3Q86UX7 667 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 NCAPG2Q86XI2 1143 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 LRRC47Q8N1G4 583 aaKnown RBP10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 STAG2Q8N3U4 1231 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 HTATIP2Q9BUP3 242 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 SLC26A6Q9BXS9 759 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 MTMR7Q9Y216 660 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 F5H6K3 240 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 CDKL5O76039 1030 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 CALM1P0DP23 149 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 CALM2P0DP24 149 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 CALM3P0DP25 149 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 FDX1P10109 184 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 TOP1P11387 765 aaKnown RBP10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 PTPREP23469 700 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 MCM4P33991 863 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 KLRC3Q07444 240 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 SLC35G1Q2M3R5 365 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 CPLX2Q6PUV4 134 aaKnown RBP10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 TMTC3Q6ZXV5 915 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 SIAH1Q8IUQ4 282 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 SRBD1Q8N5C6 995 aaKnown RBP10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 PRPF38AQ8NAV1 312 aaKnown RBP10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 SLF1Q9BQI6 1058 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 UNC93B1Q9H1C4 597 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 PORCNQ9H237 461 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 FEM1BQ9UK73 627 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 GJD2Q9UKL4 321 aa10.65□□□□□ -0.7
CHRNA1-206ENST00000416004 COL11A1P12107 1806 aaPredicted RBP10.65□□□□□ -0.71
CHRNA1-206ENST00000416004 PARP14Q460N5 1801 aa10.65□□□□□ -0.71
CHRNA1-206ENST00000416004 KIAA0100Q14667 2235 aaKnown RBP10.65□□□□□ -0.71
CHRNA1-206ENST00000416004 CCDC196A0A1B0GTZ2 297 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 hCG_1642624A0A1W2PR95 340 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 SGPL1O95470 568 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 FCER1AP12319 257 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 CLCN1P35523 988 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 GRM4Q14833 912 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 FAM173BQ6P4H8 233 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 GMCL1P1Q8NEA9 526 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 CTCFLQ8NI51 663 aaPredicted RBP10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 U2AF1L4Q8WU68 220 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 CHURC1Q8WUH1 139 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 MKL1Q969V6 931 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 ATG4CQ96DT6 458 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 BTBD7Q9P203 1132 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 MAD2L2Q9UI95 211 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 PPP1R9AQ9ULJ8 1098 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 A0A0G2JMZ2 1700 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 STK36Q9NRP7 1315 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 CNMDO75829 334 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 NDUFB10O96000 172 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 BMP3P12645 472 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 ERCC3P19447 782 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 SLC1A4P43007 532 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 SSRP1Q08945 709 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 KCTD2Q14681 263 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 MORN1Q5T089 497 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 PRPF38BQ5VTL8 546 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 SLFN13Q68D06 897 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 FAM160B2Q86V87 743 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 DEFB118Q96PH6 123 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 GBP4Q96PP9 640 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 ALG1Q9BT22 464 aa10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 MOV10L1Q9BXT6 1211 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 RBM28Q9NW13 759 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-206ENST00000416004 CNTNAP5Q8WYK1 1306 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 PALM3A6NDB9 673 aaPredicted RBP10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 H3BQV1 296 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 VWA5AO00534 786 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 FARP2O94887 1054 aaPredicted RBP10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 GOLGA8HP0CJ92 632 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 PRKAR2AP13861 404 aaKnown RBP10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 STAT3P40763 770 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 STAT2P52630 851 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 RESTQ13127 1097 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 GRB14Q14449 540 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 PPP2R5BQ15173 497 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 MCTP1Q6DN14 999 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 ABRAQ8N0Z2 381 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 TRIB2Q92519 343 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 KIFC2Q96AC6 838 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 SHISA4Q96DD7 197 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 C8orf76Q96K31 380 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 MMP19Q99542 508 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 MAP3K14Q99558 947 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 CPVLQ9H3G5 476 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 KIF3AQ9Y496 699 aa10.63□□□□□ -0.71
CHRNA1-206ENST00000416004 ZNF236Q9UL36 1845 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 MSCO60682 206 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 PEX10O60683 326 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 ADORA2AP29274 412 aa10.62□□□□□ -0.71
CHRNA1-206ENST00000416004 CNGA1P29973 690 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms