RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 CCDC146Q8IYE0 955 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 SMRP1Q8NCR6 262 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 IER2Q9BTL4 223 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 RANBP17Q9H2T7 1088 aaKnown RBP7.5□□□□□ -1.21
LMBR1-204ENST00000415428 TCP11L1Q9NUJ3 509 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.5□□□□□ -1.21
LMBR1-204ENST00000415428 C12orf60Q5U649 245 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 CCDC62Q6P9F0 684 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 FAM160B2Q86V87 743 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 DHX38Q92620 1227 aaKnown RBP7.5□□□□□ -1.21
LMBR1-204ENST00000415428 S1PR5Q9H228 398 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 KANSL2Q9H9L4 492 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 ARHGEF10LQ9HCE6 1279 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 MAGEA9P43362 315 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 IL27Q8NEV9 243 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 TSR2Q969E8 191 aaKnown RBP7.5□□□□□ -1.21
LMBR1-204ENST00000415428 SUGCTQ9HAC7 445 aa7.5□□□□□ -1.21
LMBR1-204ENST00000415428 TAL1P17542 331 aaPredicted RBP7.49□□□□□ -1.21
LMBR1-204ENST00000415428 CPT1AP50416 773 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 TTLL4Q14679 1199 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 TTF1Q15361 905 aaPredicted RBP7.49□□□□□ -1.21
LMBR1-204ENST00000415428 HFE2Q6ZVN8 426 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 ACER1Q8TDN7 264 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 GOPCQ9HD26 462 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 SOWAHBA6NEL2 793 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 APBB1O00213 710 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 GNAI3P08754 354 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 DPP9Q86TI2 863 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 GPR65Q8IYL9 337 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 POLR3GLQ9BT43 218 aa7.49□□□□□ -1.21
LMBR1-204ENST00000415428 API5Q9BZZ5 524 aaKnown RBP7.49□□□□□ -1.21
LMBR1-204ENST00000415428 SLFN5Q08AF3 891 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 PTPN21Q16825 1174 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 NBPF20Q3BBV1 942 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 ARMCX2Q7L311 632 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 ANAPC4Q9UJX5 808 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 LILRB5O75023 590 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 STAT3P40763 770 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 FSCN1Q16658 493 aaKnown RBP7.48□□□□□ -1.21
LMBR1-204ENST00000415428 SLF1Q9BQI6 1058 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 SPC25Q9HBM1 224 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 MYH7BA7E2Y1 1941 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 PLXND1Q9Y4D7 1925 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 E9PSI1 815 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 F6X3S4 739 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 SNHG28P0DPA3 235 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 MGAT3Q09327 533 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 UBE3CQ15386 1083 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 TNNI3KQ59H18 835 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 PTCRAQ6ISU1 281 aaPredicted RBP7.48□□□□□ -1.21
LMBR1-204ENST00000415428 NAA16Q6N069 864 aaPredicted RBP7.48□□□□□ -1.21
LMBR1-204ENST00000415428 CCDC105Q8IYK2 499 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 CNPY2Q9Y2B0 182 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 INSL6Q9Y581 213 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 FPGT-TNNI3KV9GXZ4 949 aa7.48□□□□□ -1.21
LMBR1-204ENST00000415428 UNC80Q8N2C7 3258 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 TNRC6BQ9UPQ9 1833 aaKnown RBP7.47□□□□□ -1.21
LMBR1-204ENST00000415428 KDM3AQ9Y4C1 1321 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 SMPD1P17405 629 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 CCDC144BQ3MJ40 725 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 CMTR2Q8IYT2 770 aaKnown RBP7.47□□□□□ -1.21
LMBR1-204ENST00000415428 PRPF38AQ8NAV1 312 aaKnown RBP7.47□□□□□ -1.21
LMBR1-204ENST00000415428 NECAB3Q96P71 396 aaPredicted RBP7.47□□□□□ -1.21
LMBR1-204ENST00000415428 MTCL1Q9Y4B5 1905 aaKnown RBP7.47□□□□□ -1.21
LMBR1-204ENST00000415428 LRP3O75074 770 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 GDF11O95390 407 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 SELPP16109 830 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 LIMK1P53667 647 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 PIH1D3Q9NQM4 214 aaKnown RBP7.47□□□□□ -1.21
LMBR1-204ENST00000415428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.47□□□□□ -1.21
LMBR1-204ENST00000415428 USP17L12C9JPN9 530 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 USP17L21D6R901 530 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 EFEMP2O95967 443 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 CA3P07451 260 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 TFF2Q03403 129 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 KCTD2Q14681 263 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 TCTN1Q2MV58 587 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 TOP1MTQ969P6 601 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 ATG4CQ96DT6 458 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 EHMT1Q9H9B1 1298 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 CABP5Q9NP86 173 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 JAG2Q9Y219 1238 aa7.47□□□□□ -1.21
LMBR1-204ENST00000415428 GRXCR1A8MXD5 290 aa7.46□□□□□ -1.21
LMBR1-204ENST00000415428 F2P00734 622 aa7.46□□□□□ -1.21
LMBR1-204ENST00000415428 RSPO2Q6UXX9 243 aaPredicted RBP7.46□□□□□ -1.21
LMBR1-204ENST00000415428 ANKS1AQ92625 1134 aa7.46□□□□□ -1.21
LMBR1-204ENST00000415428 DCP1AQ9NPI6 582 aaPredicted RBP7.46□□□□□ -1.21
LMBR1-204ENST00000415428 RNF135Q8IUD6 432 aa7.46□□□□□ -1.22
LMBR1-204ENST00000415428 STK39Q9UEW8 545 aa7.46□□□□□ -1.22
LMBR1-204ENST00000415428 GTF2IRD1Q9UHL9 959 aa7.46□□□□□ -1.22
LMBR1-204ENST00000415428 REV3LO60673 3130 aa7.46□□□□□ -1.22
LMBR1-204ENST00000415428 KIF28PB7ZC32 967 aa7.46□□□□□ -1.22
LMBR1-204ENST00000415428 PQBP1O60828 265 aaKnown RBP7.46□□□□□ -1.22
LMBR1-204ENST00000415428 TLK2Q86UE8 772 aa7.46□□□□□ -1.22
LMBR1-204ENST00000415428 OSBPL6Q9BZF3 934 aa7.46□□□□□ -1.22
LMBR1-204ENST00000415428 CLEC1BQ9P126 229 aa7.46□□□□□ -1.22
LMBR1-204ENST00000415428 ARPP21Q9UBL0 812 aaPredicted RBP7.46□□□□□ -1.22
LMBR1-204ENST00000415428 IL9P15248 144 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 ATN1P54259 1190 aaPredicted RBP7.45□□□□□ -1.22
LMBR1-204ENST00000415428 HYAL1Q12794 435 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms