RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 PDE6AP16499 860 aa22.73■■□□□ 1.23
AP1S3-205ENST00000415298 ADD2P35612 726 aa22.73■■□□□ 1.23
AP1S3-205ENST00000415298 CAPS2Q9BXY5 557 aa22.73■■□□□ 1.23
AP1S3-205ENST00000415298 TPX2Q9ULW0 747 aaKnown RBP22.73■■□□□ 1.23
AP1S3-205ENST00000415298 YBX3P16989 372 aaKnown RBP eCLIP22.73■■□□□ 1.23
AP1S3-205ENST00000415298 SCNN1BP51168 640 aa22.73■■□□□ 1.23
AP1S3-205ENST00000415298 ADGRA1Q86SQ6 560 aa22.73■■□□□ 1.23
AP1S3-205ENST00000415298 SLMAPQ14BN4 828 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 MFSD14BQ5SR56 506 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 PODNQ7Z5L7 613 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 ARL10Q8N8L6 244 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 TCRBV5S4A2TA0A5A2 114 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 GJA8P48165 433 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 IFFO1Q0D2I5 559 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 MAP3K12Q12852 859 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 DRP2Q13474 957 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 ZMYM1Q5SVZ6 1142 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 CERS5Q8N5B7 392 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 PHC3Q8NDX5 983 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 PAGR1Q9BTK6 254 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 GRIN2DO15399 1336 aa22.72■■□□□ 1.23
AP1S3-205ENST00000415298 M0R2C6 588 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 IARSP41252 1262 aaKnown RBP22.71■■□□□ 1.23
AP1S3-205ENST00000415298 TTC6Q86TZ1 520 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 WDR66Q8TBY9 1149 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 KCNV2Q8TDN2 545 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 TSC22D3Q99576 134 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.71■■□□□ 1.23
AP1S3-205ENST00000415298 TMOD4Q9NZQ9 345 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 GOLGA6L7A0A1B0GV03 622 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 MECOMQ03112 1051 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 ARHGAP27Q6ZUM4 889 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 FCHSD1Q86WN1 690 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 GALNT15Q8N3T1 639 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 CUL5Q93034 780 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 DTNBP1Q96EV8 351 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 ANO2Q9NQ90 1003 aa22.71■■□□□ 1.23
AP1S3-205ENST00000415298 PDS5AQ29RF7 1337 aaKnown RBP22.71■■□□□ 1.23
AP1S3-205ENST00000415298 DOCK2Q92608 1830 aa22.7■■□□□ 1.23
AP1S3-205ENST00000415298 HIP1O00291 1037 aa22.7■■□□□ 1.22
AP1S3-205ENST00000415298 WDHD1O75717 1129 aaPredicted RBP22.7■■□□□ 1.22
AP1S3-205ENST00000415298 GNAT1P11488 350 aa22.7■■□□□ 1.22
AP1S3-205ENST00000415298 MPP3Q13368 585 aa22.7■■□□□ 1.22
AP1S3-205ENST00000415298 TAX1BP1Q86VP1 789 aa22.7■■□□□ 1.22
AP1S3-205ENST00000415298 MYH7P12883 1935 aa22.7■■□□□ 1.22
AP1S3-205ENST00000415298 GNG11P61952 73 aa22.7■■□□□ 1.22
AP1S3-205ENST00000415298 FUKQ8N0W3 1084 aa22.7■■□□□ 1.22
AP1S3-205ENST00000415298 NSUN4Q96CB9 384 aaKnown RBP22.7■■□□□ 1.22
AP1S3-205ENST00000415298 UNC45AQ9H3U1 944 aa22.7■■□□□ 1.22
AP1S3-205ENST00000415298 ARFGEF1Q9Y6D6 1849 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 VWA3AA6NCI4 1184 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 GOLGA6L9A6NEM1 432 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 F8W031 263 aaPredicted RBP22.69■■□□□ 1.22
AP1S3-205ENST00000415298 PTH1RQ03431 593 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 CUL3Q13618 768 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 MCMDC2Q4G0Z9 681 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 ARMC9Q7Z3E5 817 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 DHX58Q96C10 678 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 IL17RAQ96F46 866 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 WDR24Q96S15 920 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 MAST3O60307 1309 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 FAM205AQ6ZU69 1335 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 B4DLN1 442 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 RAD17O75943 681 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 KRT85P78386 507 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 DIXDC1Q155Q3 683 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 C11orf57Q6ZUT1 292 aaPredicted RBP22.69■■□□□ 1.22
AP1S3-205ENST00000415298 FAM114A1Q8IWE2 563 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 MIGA1Q8NAN2 632 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 NSMCE1Q8WV22 266 aa22.69■■□□□ 1.22
AP1S3-205ENST00000415298 HOOK1Q9UJC3 728 aaKnown RBP22.69■■□□□ 1.22
AP1S3-205ENST00000415298 NDUFAB1O14561 156 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 RUFY2Q8WXA3 655 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 APPBP2Q92624 585 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 EHD4Q9H223 541 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 EBF2Q9HAK2 575 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 SPATA7Q9P0W8 599 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 GOLGA6L4A6NEF3 574 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 A6NNZ2 444 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 BIN1O00499 593 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 CUTAO60888 179 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 LDHBP07195 334 aaKnown RBP22.68■■□□□ 1.22
AP1S3-205ENST00000415298 CYP7A1P22680 504 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 VSNL1P62760 191 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 GNGT1P63211 74 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 UBE3CQ15386 1083 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 STX1AQ16623 288 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 TUBB8Q3ZCM7 444 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 ACCSLQ4AC99 568 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 TMC6Q7Z403 805 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 SALL1Q9NSC2 1324 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 RFX7Q2KHR2 1363 aa22.68■■□□□ 1.22
AP1S3-205ENST00000415298 ZFYP08048 801 aaPredicted RBP22.67■■□□□ 1.22
AP1S3-205ENST00000415298 LINGO3P0C6S8 592 aa22.67■■□□□ 1.22
AP1S3-205ENST00000415298 KIFC2Q96AC6 838 aa22.67■■□□□ 1.22
AP1S3-205ENST00000415298 UBA5Q9GZZ9 404 aa22.67■■□□□ 1.22
AP1S3-205ENST00000415298 LRRC10BA6NIK2 292 aa22.67■■□□□ 1.22
AP1S3-205ENST00000415298 ZNF202O95125 648 aa22.67■■□□□ 1.22
AP1S3-205ENST00000415298 DHX40Q8IX18 779 aaKnown RBP22.67■■□□□ 1.22
AP1S3-205ENST00000415298 RASSF8Q8NHQ8 419 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms