RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ZBTB40Q9NUA8 1239 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 CUEDC1Q9NWM3 386 aaPredicted RBP5.98□□□□□ -1.45
VPS41-205ENST00000414632 TLR7Q9NYK1 1049 aaKnown RBP5.98□□□□□ -1.45
VPS41-205ENST00000414632 HDAC9Q9UKV0 1011 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 TTF2Q9UNY4 1162 aaKnown RBP5.98□□□□□ -1.45
VPS41-205ENST00000414632 KCNH4Q9UQ05 1017 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 MYH7P12883 1935 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 WNT10BO00744 389 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 CELF2O95319 508 aaKnown RBP5.97□□□□□ -1.45
VPS41-205ENST00000414632 HMGB1P09429 215 aaKnown RBP5.97□□□□□ -1.45
VPS41-205ENST00000414632 BMP1P13497 986 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 EDN3P14138 238 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 TARSP26639 723 aaKnown RBP5.97□□□□□ -1.45
VPS41-205ENST00000414632 RBL2Q08999 1139 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 SFSWAPQ12872 951 aaKnown RBP5.97□□□□□ -1.45
VPS41-205ENST00000414632 PAK2Q13177 524 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 TNNI3KQ59H18 835 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 KRT26Q7Z3Y9 468 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 GLIS3Q8NEA6 775 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 DCPSQ96C86 337 aaKnown RBP5.97□□□□□ -1.45
VPS41-205ENST00000414632 DBNDD2Q9BQY9 259 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 EHD4Q9H223 541 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 VEZTQ9HBM0 779 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 IL1RAPL2Q9NP60 686 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 LATS2Q9NRM7 1088 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 ABT1Q9ULW3 272 aaKnown RBP5.97□□□□□ -1.45
VPS41-205ENST00000414632 FZD1Q9UP38 647 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 AKAP2Q9Y2D5 859 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 FPGT-TNNI3KV9GXZ4 949 aa5.97□□□□□ -1.45
VPS41-205ENST00000414632 PRDX5P30044 214 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 CRKP46108 304 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 GJA8P48165 433 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 VEGFBP49765 207 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 CACNB3P54284 484 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 FKBP1AP62942 108 aaKnown RBP5.96□□□□□ -1.46
VPS41-205ENST00000414632 CCINQ13939 588 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 RASGRF1Q13972 1273 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 PRKG1Q13976 671 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 DLGAP5Q15398 846 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 EFHC2Q5JST6 749 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 TTC39AQ5SRH9 613 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 PEAR1Q5VY43 1037 aaPredicted RBP5.96□□□□□ -1.46
VPS41-205ENST00000414632 CST9Q5W186 159 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 GIMAP6Q6P9H5 292 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 CDC37L1Q7L3B6 337 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 KRT25Q7Z3Z0 450 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 TRIM46Q7Z4K8 759 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 AACSQ86V21 672 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 DNAJC5GQ8N7S2 189 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 C3orf58Q8NDZ4 430 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 EAF2Q96CJ1 260 aaPredicted RBP5.96□□□□□ -1.46
VPS41-205ENST00000414632 CDCA5Q96FF9 252 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 ZBED3Q96IU2 234 aaPredicted RBP5.96□□□□□ -1.46
VPS41-205ENST00000414632 PRMT6Q96LA8 375 aaPredicted RBP5.96□□□□□ -1.46
VPS41-205ENST00000414632 NOC4LQ9BVI4 516 aaKnown RBP5.96□□□□□ -1.46
VPS41-205ENST00000414632 GSX2Q9BZM3 304 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 TDRD3Q9H7E2 651 aaKnown RBP5.96□□□□□ -1.46
VPS41-205ENST00000414632 GNL3LQ9NVN8 582 aaKnown RBP5.96□□□□□ -1.46
VPS41-205ENST00000414632 KBTBD4Q9NVX7 518 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 KANSL3Q9P2N6 904 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 ABCF2Q9UG63 623 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 PGAP2Q9UHJ9 254 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 NOP58Q9Y2X3 529 aaKnown RBP5.96□□□□□ -1.46
VPS41-205ENST00000414632 SUPT16HQ9Y5B9 1047 aaKnown RBP5.96□□□□□ -1.46
VPS41-205ENST00000414632 FOCADQ5VW36 1801 aa5.96□□□□□ -1.46
VPS41-205ENST00000414632 PAPPA2Q9BXP8 1791 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 SSC5DA1L4H1 1573 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 TCP10L2B9ZVM9 353 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 ATXN7O15265 892 aaPredicted RBP5.95□□□□□ -1.46
VPS41-205ENST00000414632 MMP20O60882 483 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 HMMRO75330 724 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 ATF4P18848 351 aaPredicted RBP5.95□□□□□ -1.46
VPS41-205ENST00000414632 MCAMP43121 646 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 FCGRTP55899 365 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 CCDC85BQ15834 202 aaPredicted RBP5.95□□□□□ -1.46
VPS41-205ENST00000414632 CCDC144BQ3MJ40 725 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 CYP4F22Q6NT55 531 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 MOB2Q70IA6 237 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 MCF2L2Q86YR7 1114 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 RPAP2Q8IXW5 612 aaPredicted RBP5.95□□□□□ -1.46
VPS41-205ENST00000414632 OR13H1Q8NG92 308 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 EXOC6Q8TAG9 804 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 WDR66Q8TBY9 1149 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 TBC1D22AQ8WUA7 517 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 GPRASP2Q96D09 838 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 ZFP42Q96MM3 310 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 RSRP1Q9BUV0 290 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 HMG20BQ9P0W2 317 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 SALL4Q9UJQ4 1053 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 DBNLQ9UJU6 430 aaKnown RBP5.95□□□□□ -1.46
VPS41-205ENST00000414632 DNMT3LQ9UJW3 386 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 DENND2AQ9ULE3 1009 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 THSD7BQ9C0I4 1608 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 ATAD5Q96QE3 1844 aa5.95□□□□□ -1.46
VPS41-205ENST00000414632 CNTNAP1P78357 1384 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 NAV1Q8NEY1 1877 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 MYH1P12882 1939 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 TMEM238LA0A1B0GVL6 79 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 FAM187AA6NFU0 413 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 PHF20L1A8MW92 1017 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms