RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 LHX8Q68G74 356 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 MAMDC4Q6UXC1 1216 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 NSMFQ6X4W1 530 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 UBE2Q1Q7Z7E8 422 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
TMEM248-202ENST00000413593 ZNF654Q8IZM8 581 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 TMTC2Q8N394 836 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 MSL3Q8N5Y2 521 aaKnown RBP11.74□□□□□ -0.53
TMEM248-202ENST00000413593 FAM133AQ8N9E0 248 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 CLEC4DQ8WXI8 215 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 MYL10Q9BUA6 226 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 LRRC2Q9BYS8 371 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 CYP39A1Q9NYL5 469 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 NRBP1Q9UHY1 535 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 OGDHLQ9ULD0 1010 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 CCDC69A6NI79 296 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 MSCO60682 206 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 CNGA1P29973 690 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 NFXL1Q6ZNB6 911 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 DHX32Q7L7V1 743 aaKnown RBP11.73□□□□□ -0.53
TMEM248-202ENST00000413593 SGMS1Q86VZ5 419 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 NUP133Q8WUM0 1156 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 MTMR8Q96EF0 704 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 TCEANC2Q96MN5 208 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 SYNGAP1Q96PV0 1343 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 MAP3K14Q99558 947 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 VAT1LQ9HCJ6 419 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 DDX20Q9UHI6 824 aaKnown RBP11.73□□□□□ -0.53
TMEM248-202ENST00000413593 SNX14Q9Y5W7 946 aa11.73□□□□□ -0.53
TMEM248-202ENST00000413593 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
TMEM248-202ENST00000413593 SEPT4O43236 478 aa11.72□□□□□ -0.53
TMEM248-202ENST00000413593 CYTH3O43739 400 aa11.72□□□□□ -0.53
TMEM248-202ENST00000413593 SNAI1O95863 264 aaPredicted RBP11.72□□□□□ -0.53
TMEM248-202ENST00000413593 HMGB1P09429 215 aaKnown RBP11.72□□□□□ -0.53
TMEM248-202ENST00000413593 ZNF865P0CJ78 1059 aaPredicted RBP11.72□□□□□ -0.53
TMEM248-202ENST00000413593 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
TMEM248-202ENST00000413593 BAATQ14032 418 aaPredicted RBP11.72□□□□□ -0.53
TMEM248-202ENST00000413593 USH1GQ495M9 461 aa11.72□□□□□ -0.53
TMEM248-202ENST00000413593 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
TMEM248-202ENST00000413593 ANKLE1Q8NAG6 615 aa11.72□□□□□ -0.53
TMEM248-202ENST00000413593 CTCFLQ8NI51 663 aaPredicted RBP11.72□□□□□ -0.53
TMEM248-202ENST00000413593 DIS3LQ8TF46 1054 aaKnown RBP11.72□□□□□ -0.53
TMEM248-202ENST00000413593 RIOX1Q9H6W3 641 aa11.72□□□□□ -0.53
TMEM248-202ENST00000413593 CNPY2Q9Y2B0 182 aa11.72□□□□□ -0.53
TMEM248-202ENST00000413593 ASTN1O14525 1302 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 ABCB11O95342 1321 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 PTPDC1A2A3K4 754 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 ZBTB5O15062 677 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 PPP1R11O60927 126 aaPredicted RBP11.71□□□□□ -0.53
TMEM248-202ENST00000413593 CALM1P0DP23 149 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 CALM2P0DP24 149 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 CALM3P0DP25 149 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 KIF5BP33176 963 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 SLC30A10Q6XR72 485 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 RNF207Q6ZRF8 634 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 FBXO11Q86XK2 927 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 CCDC144CPQ8IYA2 1237 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 RGS22Q8NE09 1264 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 JAKMIP1Q96N16 626 aaKnown RBP11.71□□□□□ -0.53
TMEM248-202ENST00000413593 PURBQ96QR8 312 aaKnown RBP11.71□□□□□ -0.53
TMEM248-202ENST00000413593 PIGSQ96S52 555 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 AMNQ9BXJ7 453 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 USP26Q9BXU7 913 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.71□□□□□ -0.53
TMEM248-202ENST00000413593 SLC12A7Q9Y666 1083 aa11.71□□□□□ -0.53
TMEM248-202ENST00000413593 ASB14A6NK59 587 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 AKR1A1P14550 325 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 CPA1P15085 419 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 RXRAP19793 462 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 CALML3P27482 149 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 RPS6P62753 249 aaKnown RBP11.7□□□□□ -0.54
TMEM248-202ENST00000413593 APOA5Q6Q788 366 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 BLOC1S2Q6QNY1 142 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 HOMER1Q86YM7 354 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 RAB11FIP4Q86YS3 637 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 PAWRQ96IZ0 340 aaKnown RBP11.7□□□□□ -0.54
TMEM248-202ENST00000413593 LZTS2Q9BRK4 669 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 SPZ1Q9BXG8 430 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 MAF1Q9H063 256 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 KATNBL1Q9H079 304 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 ABHD16BQ9H3Z7 469 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 ADD3Q9UEY8 706 aaKnown RBP11.7□□□□□ -0.54
TMEM248-202ENST00000413593 ZHX1Q9UKY1 873 aaPredicted RBP11.7□□□□□ -0.54
TMEM248-202ENST00000413593 MRPL11Q9Y3B7 192 aaKnown RBP11.7□□□□□ -0.54
TMEM248-202ENST00000413593 DDX49Q9Y6V7 483 aaKnown RBP11.7□□□□□ -0.54
TMEM248-202ENST00000413593 BRCA2P51587 3418 aa11.7□□□□□ -0.54
TMEM248-202ENST00000413593 PLEKHA8P1O95397 391 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 PSMA5P28066 241 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 SMARCA1P28370 1054 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 GNAQP50148 359 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 ACVR2BQ13705 512 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 ANO1Q5XXA6 986 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 SYNE3Q6ZMZ3 975 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 NECAB2Q7Z6G3 386 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 MICU3Q86XE3 530 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 MCF2L2Q86YR7 1114 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 FANCBQ8NB91 859 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 MORC4Q8TE76 937 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 TBC1D5Q92609 795 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 BRPF3Q9ULD4 1205 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms