RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 HSPA6P17066 643 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 XBP1P17861 261 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 C1QTNF8P60827 252 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 KIF23Q02241 960 aaPredicted RBP13.37□□□□□ -0.27
HDAC9-206ENST00000413380 TMEM132BQ14DG7 1078 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 TKFCQ3LXA3 575 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 LARP1BQ659C4 914 aaKnown RBP13.37□□□□□ -0.27
HDAC9-206ENST00000413380 FAM212AQ96EL1 285 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 C8orf76Q96K31 380 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 ZIC5Q96T25 663 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 CFHR5Q9BXR6 569 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 MORF4L1Q9UBU8 362 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 MGAMO43451 1857 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 ABCB11O95342 1321 aa13.37□□□□□ -0.27
HDAC9-206ENST00000413380 WDR33Q9C0J8 1336 aaKnown RBP13.37□□□□□ -0.27
HDAC9-206ENST00000413380 STX6O43752 255 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 MMP1P03956 469 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 CALML3P27482 149 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 KRT40Q6A162 431 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 OTUD7BQ6GQQ9 843 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 HEATR3Q7Z4Q2 680 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 RIOX2Q8IUF8 465 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 SAMD3Q8N6K7 520 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 SPRYD3Q8NCJ5 442 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 GPKOWQ92917 476 aaPredicted RBP eCLIP13.36□□□□□ -0.27
HDAC9-206ENST00000413380 GLT8D2Q9H1C3 349 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 VPS54Q9P1Q0 977 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 BTBD7Q9P203 1132 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 MTMR6Q9Y217 621 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 PCDHA1Q9Y5I3 950 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 MYH7BA7E2Y1 1941 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 PLXNB2O15031 1838 aa13.36□□□□□ -0.27
HDAC9-206ENST00000413380 TCHHQ07283 1943 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 M0R2N6 131 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 OPLAHO14841 1288 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 BRD1O95696 1058 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 CYP2C8P10632 490 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 COPB2P35606 906 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 VEGFBP49765 207 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 NAPAP54920 295 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 SNAP25P60880 206 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 PIBF1Q8WXW3 757 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 COA7Q96BR5 231 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 SPATC1LQ9H0A9 340 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 GJB4Q9NTQ9 266 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 CCPG1Q9ULG6 757 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 MRPL11Q9Y3B7 192 aaKnown RBP13.35□□□□□ -0.27
HDAC9-206ENST00000413380 DOCK3Q8IZD9 2030 aa13.35□□□□□ -0.27
HDAC9-206ENST00000413380 PIK3CDO00329 1044 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 CA12O43570 354 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 BCRP11274 1271 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 U2AF2P26368 475 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC9-206ENST00000413380 GNA11P29992 359 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 STAT3P40763 770 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
HDAC9-206ENST00000413380 ERVK-9P63128 1117 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 ERVK-24P63145 666 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 NUCB2P80303 420 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 TRIM29Q14134 588 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 GSE1Q14687 1217 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 CCDC174Q6PII3 467 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 SHCBP1Q8NEM2 672 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 SMCR8Q8TEV9 937 aaPredicted RBP13.34□□□□□ -0.27
HDAC9-206ENST00000413380 CLEC4DQ8WXI8 215 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 TNFRSF25Q93038 417 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 AGBL1Q96MI9 1066 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 FOXP1Q9H334 677 aaPredicted RBP13.34□□□□□ -0.27
HDAC9-206ENST00000413380 RAVER2Q9HCJ3 691 aaKnown RBP13.34□□□□□ -0.27
HDAC9-206ENST00000413380 TXNRD2Q9NNW7 524 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 RIC8AQ9NPQ8 531 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 MAP3K20Q9NYL2 800 aaKnown RBP13.34□□□□□ -0.27
HDAC9-206ENST00000413380 PCDHA4Q9UN74 947 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 ZDHHC9Q9Y397 364 aa13.34□□□□□ -0.27
HDAC9-206ENST00000413380 PLXNA1Q9UIW2 1896 aa13.33□□□□□ -0.27
HDAC9-206ENST00000413380 CEP350Q5VT06 3117 aa13.33□□□□□ -0.27
HDAC9-206ENST00000413380 TLR2O60603 784 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 AOC2O75106 756 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 SLC25A27O95847 323 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
HDAC9-206ENST00000413380 PKP1Q13835 747 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 TAF1CQ15572 869 aaPredicted RBP13.33□□□□□ -0.28
HDAC9-206ENST00000413380 SNRNP48Q6IEG0 339 aaKnown RBP13.33□□□□□ -0.28
HDAC9-206ENST00000413380 C17orf99Q6UX52 265 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
HDAC9-206ENST00000413380 CHST13Q8NET6 341 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 BICD2Q8TD16 824 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 CUL5Q93034 780 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 C6orf50Q9HD87 102 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 CHMP5Q9NZZ3 219 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 KCNJ14Q9UNX9 436 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 RIPK3Q9Y572 518 aa13.33□□□□□ -0.28
HDAC9-206ENST00000413380 CTDP1Q9Y5B0 961 aaPredicted RBP13.33□□□□□ -0.28
HDAC9-206ENST00000413380 SMCO2A6NFE2 343 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 H3BQV1 296 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 MEIS2O14770 477 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 HSD17B4P51659 736 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms