RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 ACRP10323 421 aa16.48■□□□□ 0.23
RAB11FIP3-202ENST00000412256 CCDC96Q2M329 555 aa16.48■□□□□ 0.23
RAB11FIP3-202ENST00000412256 MUM1L1Q5H9M0 696 aa16.48■□□□□ 0.23
RAB11FIP3-202ENST00000412256 VPS53Q5VIR6 699 aa16.48■□□□□ 0.23
RAB11FIP3-202ENST00000412256 NSMFQ6X4W1 530 aa16.48■□□□□ 0.23
RAB11FIP3-202ENST00000412256 C16orf59Q7L2K0 433 aa16.48■□□□□ 0.23
RAB11FIP3-202ENST00000412256 PDGFCQ9NRA1 345 aa16.48■□□□□ 0.23
RAB11FIP3-202ENST00000412256 CCPG1Q9ULG6 757 aa16.48■□□□□ 0.23
RAB11FIP3-202ENST00000412256 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.48■□□□□ 0.237e-6■■■□□ 18.9
RAB11FIP3-202ENST00000412256 MYH4Q9Y623 1939 aa16.48■□□□□ 0.23
RAB11FIP3-202ENST00000412256 TMEM265A0A087WTH1 108 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 GRXCR1A8MXD5 290 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 FOXP2O15409 715 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 ZEB2O60315 1214 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 PTGS1P23219 599 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 CYP2C18P33260 490 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 FSCN1Q16658 493 aaKnown RBP16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 RRP12Q5JTH9 1297 aaKnown RBP16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 TMEM240Q5SV17 173 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 IQSEC1Q6DN90 963 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 ZNF365Q70YC5 407 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 RASGRP2Q7LDG7 609 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 TLK2Q86UE8 772 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 FAM126BQ8IXS8 530 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 TIFAQ96CG3 184 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 EVI5LQ96CN4 794 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 ZNF576Q9H609 170 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 CYP39A1Q9NYL5 469 aa16.47■□□□□ 0.23
RAB11FIP3-202ENST00000412256 SMPD1P17405 629 aa16.46■□□□□ 0.23
RAB11FIP3-202ENST00000412256 SLC16A2P36021 539 aa16.46■□□□□ 0.23
RAB11FIP3-202ENST00000412256 ITGA7Q13683 1181 aa16.46■□□□□ 0.23
RAB11FIP3-202ENST00000412256 TTBK2Q6IQ55 1244 aa16.46■□□□□ 0.23
RAB11FIP3-202ENST00000412256 PURBQ96QR8 312 aaKnown RBP16.46■□□□□ 0.23
RAB11FIP3-202ENST00000412256 GNEQ9Y223 722 aaKnown RBP16.46■□□□□ 0.23
RAB11FIP3-202ENST00000412256 ASTN1O14525 1302 aa16.45■□□□□ 0.22
RAB11FIP3-202ENST00000412256 CABYRO75952 493 aa16.45■□□□□ 0.22
RAB11FIP3-202ENST00000412256 NKX3-2P78367 333 aa16.45■□□□□ 0.22
RAB11FIP3-202ENST00000412256 KIAA1211Q6ZU35 1233 aa16.45■□□□□ 0.22
RAB11FIP3-202ENST00000412256 FBXO16Q8IX29 292 aaPredicted RBP16.45■□□□□ 0.22
RAB11FIP3-202ENST00000412256 DCAF4Q8WV16 495 aa16.45■□□□□ 0.22
RAB11FIP3-202ENST00000412256 GPCPD1Q9NPB8 672 aa16.45■□□□□ 0.22
RAB11FIP3-202ENST00000412256 HELLSQ9NRZ9 838 aa16.45■□□□□ 0.22
RAB11FIP3-202ENST00000412256 ANAPC4Q9UJX5 808 aa16.45■□□□□ 0.22
RAB11FIP3-202ENST00000412256 EYSQ5T1H1 3165 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 MCM3APO60318 1980 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 ORC4O43929 436 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 CD4P01730 458 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 FGAP02671 866 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 ICAM1P05362 532 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 PBX2P40425 430 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 BAATQ14032 418 aaPredicted RBP16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 ALX1Q15699 326 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 TMEM63BQ5T3F8 832 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 TAPT1Q6NXT6 567 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 PSRC1Q6PGN9 363 aaPredicted RBP16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 TRPV6Q9H1D0 765 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 HIPK3Q9H422 1215 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 PRUNE2Q8WUY3 3088 aa16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 FRMPD2Q68DX3 1309 aaPredicted RBP16.44■□□□□ 0.22
RAB11FIP3-202ENST00000412256 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 FGBP02675 491 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 PDE1AP54750 535 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 CCL23P55773 120 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 PSMC6P62333 389 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 MCMDC2Q4G0Z9 681 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 SYDE2Q5VT97 1194 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 SLC43A3Q8NBI5 491 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 PPM1EQ8WY54 764 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 FAM227BQ96M60 508 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 PBX4Q9BYU1 374 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 VTA1Q9NP79 307 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 IL23AQ9NPF7 189 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 ADD3Q9UEY8 706 aaKnown RBP16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 Q9Y3F1 56 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 GRIN2DO15399 1336 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
RAB11FIP3-202ENST00000412256 FGRP09769 529 aa16.42■□□□□ 0.22
RAB11FIP3-202ENST00000412256 OTOP2Q7RTS6 562 aa16.42■□□□□ 0.22
RAB11FIP3-202ENST00000412256 RANBP17Q9H2T7 1088 aaKnown RBP16.42■□□□□ 0.22
RAB11FIP3-202ENST00000412256 MSRAQ9UJ68 235 aa16.42■□□□□ 0.22
RAB11FIP3-202ENST00000412256 CDH23Q9H251 3354 aa16.42■□□□□ 0.22
RAB11FIP3-202ENST00000412256 TRIM6-TRIM34B2RNG4 842 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 NFIBO00712 420 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 CALML3P27482 149 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 NOVP48745 357 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 RRP1P56182 461 aaKnown RBP16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 HAND2P61296 217 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 RASIP1Q5U651 963 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 BTNL9Q6UXG8 535 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 HERVK_113Q902F9 699 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 CRBNQ96SW2 442 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 GAS2L1Q99501 681 aaPredicted RBP16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 SEZ6LQ9BYH1 1024 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 WDR11Q9BZH6 1224 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 MTIF3Q9H2K0 278 aaKnown RBP16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 PRDM12Q9H4Q4 367 aa16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 CXXC1Q9P0U4 656 aaPredicted RBP16.41■□□□□ 0.22
RAB11FIP3-202ENST00000412256 UMODL1Q5DID0 1318 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms