RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 FRS2Q8WU20 508 aa-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 DUSP15Q9H1R2 295 aaPredicted RBP-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 ZNF318Q5VUA4 2279 aa-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 NEBP20929 6669 aa-0.16□□□□□ -2.43
RNU4-88P-201ENST00000411220 GRID2O43424 1007 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 PPP1R12BO60237 982 aaPredicted RBP-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 TRPA1O75762 1119 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 SLITRK5O94991 958 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 COL6A1P12109 1028 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 ACPPP15309 386 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 LIG1P18858 919 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 HIBADHP31937 336 aaKnown RBP-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 RGS3P49796 1198 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 TEKQ02763 1124 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 OCA2Q04671 838 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 PTPAQ15257 358 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 EZH2Q15910 746 aaKnown RBP-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 ZNF260Q3ZCT1 412 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 SPAG16Q8N0X2 631 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 PROCA1Q8NCQ7 364 aaPredicted RBP-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 RNF214Q8ND24 703 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 BEND2Q8NDZ0 799 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 ZNF384Q8TF68 577 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 EAF1Q96JC9 268 aaPredicted RBP-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 COX4I2Q96KJ9 171 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 LMF1Q96S06 567 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 GPATCH2Q9NW75 528 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 KLK14Q9P0G3 267 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 PCDHGC5Q9Y5F6 944 aa-0.16□□□□□ -2.44
RNU4-88P-201ENST00000411220 SPRR5A0A1B0GTR4 108 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 SEMA3EO15041 775 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 RAD17O75943 681 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 CYP2E1P05181 493 aaPredicted RBP-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 BMP6P22004 513 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 CYP4F8P98187 520 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 SRSF7Q16629 238 aaKnown RBP eCLIP-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 MYSM1Q5VVJ2 828 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 KIAA1614Q5VZ46 1190 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 ZNF746Q6NUN9 644 aaPredicted RBP-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 GALNT18Q6P9A2 607 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 LRP10Q7Z4F1 713 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 TSPYL5Q86VY4 417 aaPredicted RBP-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 PHTF2Q8N3S3 785 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 ZBTB38Q8NAP3 1195 aaPredicted RBP-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 WDR89Q96FK6 387 aaPredicted RBP-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 MAP6Q96JE9 813 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 LRRC37BQ96QE4 947 aa-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 TRIM56Q9BRZ2 755 aaKnown RBP-0.17□□□□□ -2.44
RNU4-88P-201ENST00000411220 MATN4O95460 622 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 CNOT4O95628 575 aaKnown RBP-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 IGLV2-14P01704 120 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 PTTG1IPP53801 180 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 RTP1P59025 263 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 SLC25A3Q00325 362 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 ERV3-1Q14264 604 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 KIR3DS1Q14943 382 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 ZC3H12AQ5D1E8 599 aaKnown RBP-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 GLDNQ6ZMI3 551 aaPredicted RBP-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 TAX1BP1Q86VP1 789 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 GPIHBP1Q8IV16 184 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 DEPDC4Q8N2C3 294 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 STAG2Q8N3U4 1231 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 ZNF808Q8N4W9 903 aaPredicted RBP-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 FBXO41Q8TF61 875 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 NXPE3Q969Y0 559 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 CHIC2Q9UKJ5 165 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 ZNF281Q9Y2X9 895 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 PCDHGA11Q9Y5H2 935 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 HCFC2Q9Y5Z7 792 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 TAF6LQ9Y6J9 622 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 COL4A3Q01955 1670 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 ZNF804BA4D1E1 1349 aa-0.18□□□□□ -2.44
RNU4-88P-201ENST00000411220 MOSPD3O75425 235 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 HNRNPUQ00839 825 aaKnown RBP eCLIP-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 TRIP4Q15650 581 aaPredicted RBP-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 MRGPRG-AS1Q2M3A8 158 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 SLFNL1Q499Z3 407 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 LY6G5CQ5SRR4 150 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 SMYD5Q6GMV2 418 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 ARMCX6Q7L4S7 300 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 DTX3Q8N9I9 347 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 SEMA6DQ8NFY4 1073 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 DDX54Q8TDD1 881 aaKnown RBP-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 C2orf49Q9BVC5 232 aaPredicted RBP-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 TMEM168Q9H0V1 697 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 ZMYM5Q9UJ78 669 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 TBC1D30Q9Y2I9 924 aa-0.19□□□□□ -2.44
RNU4-88P-201ENST00000411220 MUC12Q9UKN1 5478 aa-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 FBN1P35555 2871 aaKnown RBP-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 PRKCAP17252 672 aa-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 TTLL12Q14166 644 aaPredicted RBP-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 KIF4BQ2VIQ3 1234 aa-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 PRR31Q5SQ13 230 aa-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 CUZD1Q86UP6 607 aa-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 ASAP3Q8TDY4 903 aa-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 WFIKKN2Q8TEU8 576 aa-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 C11orf84Q9BUA3 381 aaPredicted RBP-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 MLST8Q9BVC4 326 aa-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 HIRIP3Q9BW71 556 aaPredicted RBP-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 GATA5Q9BWX5 397 aaPredicted RBP-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms