RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CHST13Q8NET6 341 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 MRFAP1L1Q96HT8 127 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TM9SF2Q99805 663 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 G6PC3Q9BUM1 346 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ACTR10Q9NZ32 417 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 UBP1Q9NZI7 540 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SIRPGQ9P1W8 387 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SUSD2Q9UGT4 822 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 KCNH3Q9ULD8 1083 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ZNRF3Q9ULT6 936 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TMA7Q9Y2S6 64 aaKnown RBP3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CADPSQ9ULU8 1353 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TLR3O15455 904 aaKnown RBP3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 NRDCO43847 1150 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 ATE1O95260 518 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PLCG1P19174 1290 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 GARTP22102 1010 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 RPL10P27635 214 aaKnown RBP3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 CAP1Q01518 475 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 IFRD2Q12894 506 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 FXNQ16595 210 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 BBS9Q3SYG4 887 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 BNC2Q6ZN30 1099 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 GK5Q6ZS86 529 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 CEP128Q6ZU80 1094 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 MCF2L2Q86YR7 1114 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 C19orf47Q8N9M1 422 aaKnown RBP3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 DVL3Q92997 716 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 MKL1Q969V6 931 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 GAL3ST3Q96A11 431 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 EAF1Q96JC9 268 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 OSBPL2Q9H1P3 480 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 GINM1Q9NU53 330 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 GMIPQ9P107 970 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 C11orf21Q9P2W6 132 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PRKAG3Q9UGI9 489 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 ZMYM5Q9UJ78 669 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 HS3ST3A1Q9Y663 406 aa3.83□□□□□ -1.8
RNU6-1140P-201ENST00000410517 BAZ1AQ9NRL2 1556 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 MRC2Q9UBG0 1479 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 FAM221AA4D161 298 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 F6X3S4 739 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 APPP05067 770 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PGRP06401 933 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 HMGB1P09429 215 aaKnown RBP3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 FBLN1P23142 703 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 GRK4P32298 578 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 ERVFRD-1P60508 538 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PTPN11Q06124 597 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 KLF10Q13118 480 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 HNRNPA0Q13151 305 aaKnown RBP3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 RAB3GAP1Q15042 981 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 RASIP1Q5U651 963 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 SLC6A19Q695T7 634 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 LRP10Q7Z4F1 713 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 TAB3Q8N5C8 712 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 RBBP8NLQ8NC74 664 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PMFBP1Q8TBY8 1022 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 SMARCC1Q92922 1105 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 ANAPC16Q96DE5 110 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 NAF1Q96HR8 494 aaKnown RBP3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 DHRS1Q96LJ7 313 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 VPS11Q9H270 941 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 TMX1Q9H3N1 280 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 EHMT1Q9H9B1 1298 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 BRMS1Q9HCU9 246 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 ING1Q9UK53 422 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PCDHB5Q9Y5E4 795 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PCDHB14Q9Y5E9 798 aa3.82□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PEG3Q9GZU2 1588 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PRR36Q9H6K5 1346 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 MEIS3P2A8K0S8 358 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 NUDT19A8MXV4 375 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 AGRPO00253 132 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 NOBOXO60393 691 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 RAG1P15918 1043 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PFKLP17858 780 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 NCLP19338 710 aaKnown RBP3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 GJA9P57773 515 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 RNF4P78317 190 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 RBL2Q08999 1139 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 TMEM62Q0P6H9 643 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 VWA3BQ502W6 1294 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 TMEM201Q5SNT2 666 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 ZNF575Q86XF7 245 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 PHACTR4Q8IZ21 702 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 FAM13CQ8NE31 585 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 KISS1RQ969F8 398 aaPredicted RBP3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 DNAJC2Q99543 621 aaKnown RBP3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 ZNF747Q9BV97 191 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 LNPKQ9C0E8 428 aa3.81□□□□□ -1.8
RNU6-1140P-201ENST00000410517 THOC2Q8NI27 1593 aaKnown RBP3.8□□□□□ -1.8
RNU6-1140P-201ENST00000410517 IGSF3O75054 1194 aa3.8□□□□□ -1.8
RNU6-1140P-201ENST00000410517 HTR3BO95264 441 aa3.8□□□□□ -1.8
RNU6-1140P-201ENST00000410517 AMHP03971 560 aa3.8□□□□□ -1.8
RNU6-1140P-201ENST00000410517 IGFBP6P24592 240 aaPredicted RBP3.8□□□□□ -1.8
RNU6-1140P-201ENST00000410517 GUCY2CP25092 1073 aa3.8□□□□□ -1.8
RNU6-1140P-201ENST00000410517 KIR2DL1P43626 348 aaPredicted RBP3.8□□□□□ -1.8
RNU6-1140P-201ENST00000410517 KIR2DL2P43627 348 aaPredicted RBP3.8□□□□□ -1.8
RNU6-1140P-201ENST00000410517 GIPRP48546 466 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms