RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ZNF658Q5TYW1 1059 aaPredicted RBP15.33■□□□□ 0.04
LIMS1-205ENST00000410093 ANKRD20A12PQ8NF67 263 aa15.33■□□□□ 0.04
LIMS1-205ENST00000410093 MTMR8Q96EF0 704 aa15.33■□□□□ 0.04
LIMS1-205ENST00000410093 PIGSQ96S52 555 aa15.33■□□□□ 0.04
LIMS1-205ENST00000410093 RIC8AQ9NPQ8 531 aa15.33■□□□□ 0.04
LIMS1-205ENST00000410093 SYNRGQ9UMZ2 1314 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 SCN9AQ15858 1988 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 UQCRHLA0A096LP55 91 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 PPIP5K2O43314 1243 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 UQCRHP07919 91 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
LIMS1-205ENST00000410093 MMP14P50281 582 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 SCNN1DP51172 638 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 STIM1Q13586 685 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 PDIA5Q14554 519 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 IL17AQ16552 155 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 TATDN1Q6P1N9 297 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 TMEM179Q6ZVK1 233 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 NIM1KQ8IY84 436 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 LRRC27Q9C0I9 530 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 RWDD2AQ9UIY3 292 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 SIPA1L1O43166 1804 aa15.32■□□□□ 0.04
LIMS1-205ENST00000410093 FZD9O00144 591 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 ZBTB5O15062 677 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 RPN1P04843 607 aaKnown RBP15.31■□□□□ 0.04
LIMS1-205ENST00000410093 ATP1A3P13637 1013 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 TMEM266Q2M3C6 531 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 SPECC1LQ69YQ0 1117 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 PPP4R3AQ6IN85 833 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 HOMER1Q86YM7 354 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 CUL5Q93034 780 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 MAP7D2Q96T17 732 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 DBNDD1Q9H9R9 158 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 ADAMTSL1Q8N6G6 1762 aa15.31■□□□□ 0.04
LIMS1-205ENST00000410093 A0A1B0GTH6 734 aa15.3■□□□□ 0.04
LIMS1-205ENST00000410093 PPP1R3GB7ZBB8 358 aa15.3■□□□□ 0.04
LIMS1-205ENST00000410093 CCNT1O60563 726 aaKnown RBP15.3■□□□□ 0.04
LIMS1-205ENST00000410093 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
LIMS1-205ENST00000410093 CERKLQ49MI3 558 aaPredicted RBP15.3■□□□□ 0.04
LIMS1-205ENST00000410093 CDKAL1Q5VV42 579 aa15.3■□□□□ 0.04
LIMS1-205ENST00000410093 CCAR2Q8N163 923 aaKnown RBP15.3■□□□□ 0.04
LIMS1-205ENST00000410093 RASSF8Q8NHQ8 419 aa15.3■□□□□ 0.04
LIMS1-205ENST00000410093 NOC3LQ8WTT2 800 aaKnown RBP15.3■□□□□ 0.04
LIMS1-205ENST00000410093 CALML4Q96GE6 196 aa15.3■□□□□ 0.04
LIMS1-205ENST00000410093 KBTBD4Q9NVX7 518 aa15.3■□□□□ 0.04
LIMS1-205ENST00000410093 GJA3Q9Y6H8 435 aa15.3■□□□□ 0.04
LIMS1-205ENST00000410093 GOLGA6L9A6NEM1 432 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.04
LIMS1-205ENST00000410093 FMR1Q06787 632 aaKnown RBP eCLIP15.29■□□□□ 0.04
LIMS1-205ENST00000410093 TBX2Q13207 712 aaPredicted RBP15.29■□□□□ 0.04
LIMS1-205ENST00000410093 NR1I3Q14994 352 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 PTPN14Q15678 1187 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 LETM2Q2VYF4 491 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 ARMCX5Q6P1M9 558 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 KIAA0825Q8IV33 1275 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 GRAMD1CQ8IYS0 662 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 ADGRF4Q8IZF3 695 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 GPC2Q8N158 579 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 IGSF22Q8N9C0 903 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 GMCL1P1Q8NEA9 526 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 RASGRP4Q8TDF6 673 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 TBCKQ8TEA7 893 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 TMX1Q9H3N1 280 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 JMJD4Q9H9V9 463 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 TMOD2Q9NZR1 351 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 STK17AQ9UEE5 414 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 HERC5Q9UII4 1024 aaKnown RBP15.29■□□□□ 0.04
LIMS1-205ENST00000410093 HACL1Q9UJ83 578 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 MTMR7Q9Y216 660 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 WDR90Q96KV7 1748 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 ZNF541Q9H0D2 1346 aa15.29■□□□□ 0.04
LIMS1-205ENST00000410093 LRRC10BA6NIK2 292 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 POTECB2RU33 542 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 H7C1D1 291 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 MPHOSPH10O00566 681 aaKnown RBP15.28■□□□□ 0.04
LIMS1-205ENST00000410093 ARHGAP6O43182 974 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 TNNT1P13805 278 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 PAK1Q13153 545 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 AOC3Q16853 763 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 COBLL1Q53SF7 1204 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 NYAP1Q6ZVC0 841 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 CABP7Q86V35 215 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 LRRC47Q8N1G4 583 aaKnown RBP15.28■□□□□ 0.04
LIMS1-205ENST00000410093 L3MBTL3Q96JM7 780 aaPredicted RBP15.28■□□□□ 0.04
LIMS1-205ENST00000410093 NAA15Q9BXJ9 866 aaKnown RBP15.28■□□□□ 0.04
LIMS1-205ENST00000410093 VAT1LQ9HCJ6 419 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 HDAC9Q9UKV0 1011 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 STK24Q9Y6E0 443 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 ITIH6Q6UXX5 1313 aa15.28■□□□□ 0.04
LIMS1-205ENST00000410093 ZSCAN12O43309 604 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 STX10O60499 249 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 RHOBTB3O94955 611 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 CLK2P49760 499 aaKnown RBP15.27■□□□□ 0.04
LIMS1-205ENST00000410093 NFIAQ12857 509 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 SYCP1Q15431 976 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 CCDC96Q2M329 555 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 EAPPQ56P03 285 aaPredicted RBP15.27■□□□□ 0.04
LIMS1-205ENST00000410093 FKBP1CQ5VVH2 108 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 MOXD1Q6UVY6 613 aa15.27■□□□□ 0.04
LIMS1-205ENST00000410093 C17orf53Q8N3J3 647 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms