RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 TBC1D8O95759 1140 aa17.55■□□□□ 0.4
LSM5-207ENST00000410044 GJB2P29033 226 aa17.55■□□□□ 0.4
LSM5-207ENST00000410044 GHRHRQ02643 423 aa17.55■□□□□ 0.4
LSM5-207ENST00000410044 PLS1Q14651 629 aa17.55■□□□□ 0.4
LSM5-207ENST00000410044 PPP1R18Q6NYC8 613 aa17.55■□□□□ 0.4
LSM5-207ENST00000410044 CLEC4DQ8WXI8 215 aa17.55■□□□□ 0.4
LSM5-207ENST00000410044 MROH8Q9H579 483 aa17.55■□□□□ 0.4
LSM5-207ENST00000410044 MAP3K20Q9NYL2 800 aaKnown RBP17.55■□□□□ 0.4
LSM5-207ENST00000410044 FBXO40Q9UH90 709 aa17.55■□□□□ 0.4
LSM5-207ENST00000410044 KIF3AQ9Y496 699 aa17.55■□□□□ 0.4
LSM5-207ENST00000410044 ESYT2A0FGR8 921 aa17.54■□□□□ 0.4
LSM5-207ENST00000410044 DTNBO60941 627 aa17.54■□□□□ 0.4
LSM5-207ENST00000410044 ALAS1P13196 640 aa17.54■□□□□ 0.4
LSM5-207ENST00000410044 TYW1BQ6NUM6 668 aa17.54■□□□□ 0.4
LSM5-207ENST00000410044 FAM184AQ8NB25 1140 aa17.54■□□□□ 0.4
LSM5-207ENST00000410044 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
LSM5-207ENST00000410044 GPKOWQ92917 476 aaPredicted RBP eCLIP17.54■□□□□ 0.4
LSM5-207ENST00000410044 SHISA4Q96DD7 197 aa17.54■□□□□ 0.4
LSM5-207ENST00000410044 AIFM3Q96NN9 605 aa17.54■□□□□ 0.4
LSM5-207ENST00000410044 TRERF1Q96PN7 1200 aa17.54■□□□□ 0.4
LSM5-207ENST00000410044 ALG1Q9BT22 464 aa17.54■□□□□ 0.4
LSM5-207ENST00000410044 ZNFX1Q9P2E3 1918 aaKnown RBP17.53■□□□□ 0.4
LSM5-207ENST00000410044 OPLAHO14841 1288 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 XBP1P17861 261 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 ERCC3P19447 782 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 MAPK4P31152 587 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 USH1GQ495M9 461 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 GALNT17Q6IS24 598 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 HEATR3Q7Z4Q2 680 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 BEGAINQ9BUH8 593 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 ZMYND12Q9H0C1 365 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 PORCNQ9H237 461 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 CWC22Q9HCG8 908 aaKnown RBP17.53■□□□□ 0.4
LSM5-207ENST00000410044 RNF146Q9NTX7 359 aa17.53■□□□□ 0.4
LSM5-207ENST00000410044 GPR25O00155 361 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 STRNO43815 780 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 PDIA4P13667 645 aaKnown RBP17.52■□□□□ 0.4
LSM5-207ENST00000410044 NAPAP54920 295 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 SP3Q02447 781 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 MUM1L1Q5H9M0 696 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 MCF2L2Q86YR7 1114 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 ABRAQ8N0Z2 381 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 CCDC148Q8NFR7 591 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 PHF20Q9BVI0 1012 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 GLT8D2Q9H1C3 349 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 ACAD9Q9H845 621 aa17.52■□□□□ 0.4
LSM5-207ENST00000410044 SMCO2A6NFE2 343 aa17.51■□□□□ 0.39
LSM5-207ENST00000410044 PIK3CDO00329 1044 aa17.51■□□□□ 0.39
LSM5-207ENST00000410044 MGAMO43451 1857 aa17.51■□□□□ 0.39
LSM5-207ENST00000410044 HSP90AA1P07900 732 aaKnown RBP17.51■□□□□ 0.39
LSM5-207ENST00000410044 NCAPG2Q86XI2 1143 aa17.51■□□□□ 0.39
LSM5-207ENST00000410044 FBXO18Q8NFZ0 1043 aa17.51■□□□□ 0.39
LSM5-207ENST00000410044 EFCC1Q9HA90 598 aa17.51■□□□□ 0.39
LSM5-207ENST00000410044 RIC8AQ9NPQ8 531 aa17.51■□□□□ 0.39
LSM5-207ENST00000410044 VPS54Q9P1Q0 977 aa17.51■□□□□ 0.39
LSM5-207ENST00000410044 DOCK3Q8IZD9 2030 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 NFIBO00712 420 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 TAL1P17542 331 aaPredicted RBP17.5■□□□□ 0.39
LSM5-207ENST00000410044 PDCP20941 246 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 CALML3P27482 149 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 GNA11P29992 359 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 HSD17B4P51659 736 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 MRPL12P52815 198 aaKnown RBP17.5■□□□□ 0.39
LSM5-207ENST00000410044 NPY5RQ15761 445 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 DAGLBQ8NCG7 672 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 C8orf76Q96K31 380 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 PSTPIP2Q9H939 334 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 C6orf50Q9HD87 102 aa17.5■□□□□ 0.39
LSM5-207ENST00000410044 MEIS2O14770 477 aa17.49■□□□□ 0.39
LSM5-207ENST00000410044 PTPREP23469 700 aa17.49■□□□□ 0.39
LSM5-207ENST00000410044 SLC4A3P48751 1232 aa17.49■□□□□ 0.39
LSM5-207ENST00000410044 CLK2P49760 499 aaKnown RBP17.49■□□□□ 0.39
LSM5-207ENST00000410044 NLRP5P59047 1200 aa17.49■□□□□ 0.39
LSM5-207ENST00000410044 LACTBP83111 547 aaPredicted RBP17.49■□□□□ 0.39
LSM5-207ENST00000410044 LARP1BQ659C4 914 aaKnown RBP17.49■□□□□ 0.39
LSM5-207ENST00000410044 KRT40Q6A162 431 aa17.49■□□□□ 0.39
LSM5-207ENST00000410044 GPR142Q7Z601 462 aa17.49■□□□□ 0.39
LSM5-207ENST00000410044 PLEKHH3Q7Z736 793 aa17.49■□□□□ 0.39
LSM5-207ENST00000410044 TBC1D5Q92609 795 aa17.49■□□□□ 0.39
LSM5-207ENST00000410044 A1CFQ9NQ94 594 aaKnown RBP17.49■□□□□ 0.39
LSM5-207ENST00000410044 GJB4Q9NTQ9 266 aa17.49■□□□□ 0.39
LSM5-207ENST00000410044 FOXD4L1Q9NU39 408 aa17.49■□□□□ 0.39
LSM5-207ENST00000410044 DNAJC25-GNG10A0A024R161 153 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 GCOM1H8Y6P7 765 aaPredicted RBP17.48■□□□□ 0.39
LSM5-207ENST00000410044 M0R2N6 131 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 FKTNO75072 461 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 MMP1P03956 469 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 POLR2MP0CAP2 368 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 FCER1AP12319 257 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 TRIM29Q14134 588 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 MCTP2Q6DN12 878 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 CCAR1Q8IX12 1150 aaKnown RBP17.48■□□□□ 0.39
LSM5-207ENST00000410044 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 CUL5Q93034 780 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
LSM5-207ENST00000410044 HOMER2Q9NSB8 354 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 CYP39A1Q9NYL5 469 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 PCDHA4Q9UN74 947 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 KCNJ14Q9UNX9 436 aa17.48■□□□□ 0.39
LSM5-207ENST00000410044 PFASO15067 1338 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms