RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 KRT2P35908 639 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 SPECC1Q5M775 1068 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 TMEM179Q6ZVK1 233 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 CCAR1Q8IX12 1150 aaKnown RBP12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 KIF18AQ8NI77 898 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 DPF2Q92785 391 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 TNFRSF25Q93038 417 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 COA7Q96BR5 231 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 RNF181Q9P0P0 153 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 A0A1B0GVL5 298 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 USP17L10C9JJH3 530 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 STXBP3O00186 592 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 NRDCO43847 1150 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 PPP1R11O60927 126 aaPredicted RBP12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 XBP1P17861 261 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 GNAQP50148 359 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 INHBEP58166 350 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 ZNF445P59923 1031 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 SETDB1Q15047 1291 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 NBPF12Q5TAG4 269 aaPredicted RBP12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 ANGEL2Q5VTE6 544 aaKnown RBP12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 SYT10Q6XYQ8 523 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 PIK3AP1Q6ZUJ8 805 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 FAM83AQ86UY5 434 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 ADGRF4Q8IZF3 695 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 ERCC4Q92889 916 aaPredicted RBP12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 TSPAN18Q96SJ8 248 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 SPZ1Q9BXG8 430 aa12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 NUCKS1Q9H1E3 243 aaKnown RBP12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 HERC5Q9UII4 1024 aaKnown RBP12.17□□□□□ -0.46
LRRTM4-204ENST00000409884 F5H6K3 240 aa12.16□□□□□ -0.46
LRRTM4-204ENST00000409884 KLRC3Q07444 240 aa12.16□□□□□ -0.46
LRRTM4-204ENST00000409884 DGKZQ13574 1117 aa12.16□□□□□ -0.46
LRRTM4-204ENST00000409884 SLC39A14Q15043 492 aa12.16□□□□□ -0.46
LRRTM4-204ENST00000409884 SLFN13Q68D06 897 aa12.16□□□□□ -0.46
LRRTM4-204ENST00000409884 DEFB129Q9H1M3 183 aa12.16□□□□□ -0.46
LRRTM4-204ENST00000409884 JMJD4Q9H9V9 463 aa12.16□□□□□ -0.46
LRRTM4-204ENST00000409884 GPRC5DQ9NZD1 345 aa12.16□□□□□ -0.46
LRRTM4-204ENST00000409884 COL2A1P02458 1487 aaPredicted RBP12.16□□□□□ -0.46
LRRTM4-204ENST00000409884 NDUFB10O96000 172 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 TPM3P06753 285 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 SLC1A4P43007 532 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 CCDC183Q5T5S1 534 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 FKBP1CQ5VVH2 108 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 CKAP2LQ8IYA6 745 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 FSIP1Q8NA03 581 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 RRP36Q96EU6 259 aaKnown RBP12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 RIOX1Q9H6W3 641 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 BARHL2Q9NY43 387 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 FAM53CQ9NYF3 392 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 NYAP2Q9P242 653 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 ZBTB21Q9ULJ3 1066 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 POLR2AP24928 1970 aaKnown RBP12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 A0A087WWV3 80 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 ANKRD33BA6NCL7 494 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 YEATS4O95619 227 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 SNW1Q13573 536 aaKnown RBP12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 ASPRV1Q53RT3 343 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 ATL3Q6DD88 541 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 MKL1Q969V6 931 aa12.15□□□□□ -0.46
LRRTM4-204ENST00000409884 PHF20L1A8MW92 1017 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 H7C1D1 291 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 MAP2K2P36507 400 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 NDUFA8P51970 172 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 NAPAP54920 295 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 ZNF174Q15697 407 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 TTC31Q49AM3 519 aaPredicted RBP12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 BLIDQ8IZY5 108 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 RNF214Q8ND24 703 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 RBSNQ9H1K0 784 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 GGA3Q9NZ52 723 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 SMCHD1A6NHR9 2005 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 DICER1Q9UPY3 1922 aaKnown RBP12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 PAX7P23759 505 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 CAP2P40123 477 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 SHC4Q6S5L8 630 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 SUGP1Q8IWZ8 645 aaKnown RBP12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 GPC2Q8N158 579 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 ANKRD20A12PQ8NF67 263 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 KCNG4Q8TDN1 519 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 LZTS2Q9BRK4 669 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 TMEM260Q9NX78 707 aa12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 SEC63Q9UGP8 760 aaKnown RBP12.14□□□□□ -0.47
LRRTM4-204ENST00000409884 SMCO2A6NFE2 343 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 INPP5BP32019 993 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 PRKG1Q13976 671 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 ZSCAN26Q16670 478 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 RILPL1Q5EBL4 403 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 ADALQ6DHV7 355 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 LRSAM1Q6UWE0 723 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 ENGASEQ8NFI3 743 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 PCDHA4Q9UN74 947 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
LRRTM4-204ENST00000409884 TMEM232C9JQI7 657 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms