RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 QRICH1Q2TAL8 776 aa36.29■■■■□ 3.4
TRAF3IP1-203ENST00000409739 TINF2Q9BSI4 451 aa36.29■■■■□ 3.4
TRAF3IP1-203ENST00000409739 VAT1LQ9HCJ6 419 aa36.29■■■■□ 3.4
TRAF3IP1-203ENST00000409739 HMGB1P09429 215 aaKnown RBP36.28■■■■□ 3.4
TRAF3IP1-203ENST00000409739 USH1GQ495M9 461 aa36.28■■■■□ 3.4
TRAF3IP1-203ENST00000409739 SGMS1Q86VZ5 419 aa36.28■■■■□ 3.4
TRAF3IP1-203ENST00000409739 FAM133AQ8N9E0 248 aa36.28■■■■□ 3.4
TRAF3IP1-203ENST00000409739 CLEC4DQ8WXI8 215 aa36.28■■■■□ 3.4
TRAF3IP1-203ENST00000409739 JAKMIP1Q96N16 626 aaKnown RBP36.28■■■■□ 3.4
TRAF3IP1-203ENST00000409739 MAP3K14Q99558 947 aa36.28■■■■□ 3.4
TRAF3IP1-203ENST00000409739 PDE4DIPQ5VU43 2346 aa36.28■■■■□ 3.4
TRAF3IP1-203ENST00000409739 NSMFQ6X4W1 530 aa36.27■■■■□ 3.4
TRAF3IP1-203ENST00000409739 ZNF467Q7Z7K2 595 aaPredicted RBP36.27■■■■□ 3.4
TRAF3IP1-203ENST00000409739 MTMR8Q96EF0 704 aa36.27■■■■□ 3.4
TRAF3IP1-203ENST00000409739 CYP39A1Q9NYL5 469 aa36.27■■■■□ 3.4
TRAF3IP1-203ENST00000409739 POTEB2H3BUK9 544 aa36.26■■■■□ 3.4
TRAF3IP1-203ENST00000409739 CNTN2Q02246 1040 aa36.26■■■■□ 3.4
TRAF3IP1-203ENST00000409739 MSL3Q8N5Y2 521 aaKnown RBP36.26■■■■□ 3.4
TRAF3IP1-203ENST00000409739 CPA1P15085 419 aa36.25■■■■□ 3.39
TRAF3IP1-203ENST00000409739 PRAMEF19Q5SWL8 479 aa36.25■■■■□ 3.39
TRAF3IP1-203ENST00000409739 MAMDC4Q6UXC1 1216 aa36.25■■■■□ 3.39
TRAF3IP1-203ENST00000409739 CTCFLQ8NI51 663 aaPredicted RBP36.25■■■■□ 3.39
TRAF3IP1-203ENST00000409739 RIOX1Q9H6W3 641 aa36.25■■■■□ 3.39
TRAF3IP1-203ENST00000409739 SLC12A7Q9Y666 1083 aa36.25■■■■□ 3.39
TRAF3IP1-203ENST00000409739 CYTH3O43739 400 aa36.24■■■■□ 3.39
TRAF3IP1-203ENST00000409739 TFRCP02786 760 aaKnown RBP36.24■■■■□ 3.39
TRAF3IP1-203ENST00000409739 SYNGAP1Q96PV0 1343 aa36.24■■■■□ 3.39
TRAF3IP1-203ENST00000409739 RXRAP19793 462 aa36.23■■■■□ 3.39
TRAF3IP1-203ENST00000409739 CNGA1P29973 690 aa36.23■■■■□ 3.39
TRAF3IP1-203ENST00000409739 KIF5BP33176 963 aa36.23■■■■□ 3.39
TRAF3IP1-203ENST00000409739 LHX8Q68G74 356 aa36.23■■■■□ 3.39
TRAF3IP1-203ENST00000409739 FBXO11Q86XK2 927 aa36.23■■■■□ 3.39
TRAF3IP1-203ENST00000409739 NRBP1Q9UHY1 535 aa36.23■■■■□ 3.39
TRAF3IP1-203ENST00000409739 ABCB11O95342 1321 aa36.23■■■■□ 3.39
TRAF3IP1-203ENST00000409739 SOWAHBA6NEL2 793 aa36.22■■■■□ 3.39
TRAF3IP1-203ENST00000409739 CALM1P0DP23 149 aa36.22■■■■□ 3.39
TRAF3IP1-203ENST00000409739 CALM2P0DP24 149 aa36.22■■■■□ 3.39
TRAF3IP1-203ENST00000409739 CALM3P0DP25 149 aa36.22■■■■□ 3.39
TRAF3IP1-203ENST00000409739 CAPN2P17655 700 aa36.22■■■■□ 3.39
TRAF3IP1-203ENST00000409739 BLOC1S2Q6QNY1 142 aa36.22■■■■□ 3.39
TRAF3IP1-203ENST00000409739 RAB11FIP4Q86YS3 637 aa36.22■■■■□ 3.39
TRAF3IP1-203ENST00000409739 DDX20Q9UHI6 824 aaKnown RBP36.22■■■■□ 3.39
TRAF3IP1-203ENST00000409739 ASTN1O14525 1302 aa36.22■■■■□ 3.39
TRAF3IP1-203ENST00000409739 ZBTB5O15062 677 aa36.21■■■■□ 3.39
TRAF3IP1-203ENST00000409739 BAATQ14032 418 aaPredicted RBP36.21■■■■□ 3.39
TRAF3IP1-203ENST00000409739 SLC30A10Q6XR72 485 aa36.21■■■■□ 3.39
TRAF3IP1-203ENST00000409739 UBE2Q1Q7Z7E8 422 aa36.21■■■■□ 3.39
TRAF3IP1-203ENST00000409739 HOMER1Q86YM7 354 aa36.21■■■■□ 3.39
TRAF3IP1-203ENST00000409739 OGDHLQ9ULD0 1010 aa36.21■■■■□ 3.39
TRAF3IP1-203ENST00000409739 PTPDC1A2A3K4 754 aa36.2■■■■□ 3.39
TRAF3IP1-203ENST00000409739 PPP1R11O60927 126 aaPredicted RBP36.2■■■■□ 3.39
TRAF3IP1-203ENST00000409739 SNAI1O95863 264 aaPredicted RBP36.2■■■■□ 3.39
TRAF3IP1-203ENST00000409739 APOA5Q6Q788 366 aa36.2■■■■□ 3.39
TRAF3IP1-203ENST00000409739 MICU3Q86XE3 530 aa36.2■■■■□ 3.39
TRAF3IP1-203ENST00000409739 CCDC144CPQ8IYA2 1237 aa36.2■■■■□ 3.39
TRAF3IP1-203ENST00000409739 PIGSQ96S52 555 aa36.2■■■■□ 3.39
TRAF3IP1-203ENST00000409739 SEPT4O43236 478 aa36.19■■■■□ 3.38
TRAF3IP1-203ENST00000409739 MSCO60682 206 aa36.19■■■■□ 3.38
TRAF3IP1-203ENST00000409739 FARP2O94887 1054 aaPredicted RBP36.19■■■■□ 3.38
TRAF3IP1-203ENST00000409739 CASTP20810 708 aaKnown RBP36.19■■■■□ 3.38
TRAF3IP1-203ENST00000409739 PSMA5P28066 241 aa36.19■■■■□ 3.38
TRAF3IP1-203ENST00000409739 RNF207Q6ZRF8 634 aa36.19■■■■□ 3.38
TRAF3IP1-203ENST00000409739 ARMCX2Q7L311 632 aa36.19■■■■□ 3.38
TRAF3IP1-203ENST00000409739 PURBQ96QR8 312 aaKnown RBP36.19■■■■□ 3.38
TRAF3IP1-203ENST00000409739 SPZ1Q9BXG8 430 aa36.19■■■■□ 3.38
TRAF3IP1-203ENST00000409739 AMNQ9BXJ7 453 aa36.19■■■■□ 3.38
TRAF3IP1-203ENST00000409739 ALPK3Q96L96 1907 aa36.18■■■■□ 3.38
TRAF3IP1-203ENST00000409739 PLEKHA8P1O95397 391 aa36.18■■■■□ 3.38
TRAF3IP1-203ENST00000409739 RPS6KB1P23443 525 aa36.18■■■■□ 3.38
TRAF3IP1-203ENST00000409739 CDKN2AIPQ9NXV6 580 aaPredicted RBP36.18■■■■□ 3.38
TRAF3IP1-203ENST00000409739 BRPF3Q9ULD4 1205 aa36.18■■■■□ 3.38
TRAF3IP1-203ENST00000409739 CNPY2Q9Y2B0 182 aa36.18■■■■□ 3.38
TRAF3IP1-203ENST00000409739 ZNF865P0CJ78 1059 aaPredicted RBP36.17■■■■□ 3.38
TRAF3IP1-203ENST00000409739 GNAQP50148 359 aa36.17■■■■□ 3.38
TRAF3IP1-203ENST00000409739 RPS6P62753 249 aaKnown RBP36.17■■■■□ 3.38
TRAF3IP1-203ENST00000409739 CALML3P27482 149 aa36.16■■■■□ 3.38
TRAF3IP1-203ENST00000409739 SYNE3Q6ZMZ3 975 aa36.16■■■■□ 3.38
TRAF3IP1-203ENST00000409739 Q6ZUG5 572 aa36.16■■■■□ 3.38
TRAF3IP1-203ENST00000409739 ANKLE1Q8NAG6 615 aa36.16■■■■□ 3.38
TRAF3IP1-203ENST00000409739 FANCBQ8NB91 859 aa36.16■■■■□ 3.38
TRAF3IP1-203ENST00000409739 LZTS2Q9BRK4 669 aa36.16■■■■□ 3.38
TRAF3IP1-203ENST00000409739 MRPL11Q9Y3B7 192 aaKnown RBP36.16■■■■□ 3.38
TRAF3IP1-203ENST00000409739 SMARCA1P28370 1054 aa36.15■■■■□ 3.38
TRAF3IP1-203ENST00000409739 MNX1P50219 401 aaPredicted RBP36.15■■■■□ 3.38
TRAF3IP1-203ENST00000409739 FGD1P98174 961 aa36.15■■■■□ 3.38
TRAF3IP1-203ENST00000409739 SRBD1Q8N5C6 995 aaKnown RBP36.15■■■■□ 3.38
TRAF3IP1-203ENST00000409739 RGS22Q8NE09 1264 aa36.15■■■■□ 3.38
TRAF3IP1-203ENST00000409739 PNMA6FA0A0J9YX94 578 aa36.14■■■■□ 3.38
TRAF3IP1-203ENST00000409739 KLF18A0A0U1RQI7 1052 aa36.14■■■■□ 3.38
TRAF3IP1-203ENST00000409739 ASB14A6NK59 587 aa36.14■■■■□ 3.38
TRAF3IP1-203ENST00000409739 ANO1Q5XXA6 986 aa36.14■■■■□ 3.38
TRAF3IP1-203ENST00000409739 DIS3LQ8TF46 1054 aaKnown RBP36.14■■■■□ 3.38
TRAF3IP1-203ENST00000409739 DDX49Q9Y6V7 483 aaKnown RBP36.14■■■■□ 3.38
TRAF3IP1-203ENST00000409739 ZBTB43O43298 467 aa36.13■■■■□ 3.37
TRAF3IP1-203ENST00000409739 TMTC3Q6ZXV5 915 aa36.13■■■■□ 3.37
TRAF3IP1-203ENST00000409739 CMTR1Q8N1G2 835 aaKnown RBP36.13■■■■□ 3.37
TRAF3IP1-203ENST00000409739 FBXL16Q8N461 479 aa36.13■■■■□ 3.37
TRAF3IP1-203ENST00000409739 PIBF1Q8WXW3 757 aa36.13■■■■□ 3.37
TRAF3IP1-203ENST00000409739 MAF1Q9H063 256 aa36.13■■■■□ 3.37
TRAF3IP1-203ENST00000409739 ABHD16BQ9H3Z7 469 aa36.13■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms