RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 TLK2Q86UE8 772 aa20.15■□□□□ 0.82
SCRN1-203ENST00000409570 KBTBD3Q8NAB2 608 aa20.15■□□□□ 0.82
SCRN1-203ENST00000409570 UHRF1Q96T88 793 aaPredicted RBP20.15■□□□□ 0.82
SCRN1-203ENST00000409570 NOC4LQ9BVI4 516 aaKnown RBP20.15■□□□□ 0.82
SCRN1-203ENST00000409570 LRRCC1Q9C099 1032 aa20.15■□□□□ 0.82
SCRN1-203ENST00000409570 WNT8AQ9H1J5 351 aa20.15■□□□□ 0.82
SCRN1-203ENST00000409570 DDX49Q9Y6V7 483 aaKnown RBP20.15■□□□□ 0.82
SCRN1-203ENST00000409570 ZNF536O15090 1300 aa20.15■□□□□ 0.82
SCRN1-203ENST00000409570 PLIN4Q96Q06 1357 aa20.15■□□□□ 0.82
SCRN1-203ENST00000409570 XIRP2A4UGR9 3374 aa20.14■□□□□ 0.82
SCRN1-203ENST00000409570 TMEM232C9JQI7 657 aa20.14■□□□□ 0.81
SCRN1-203ENST00000409570 GPAA1O43292 621 aa20.14■□□□□ 0.81
SCRN1-203ENST00000409570 SMPD1P17405 629 aa20.14■□□□□ 0.81
SCRN1-203ENST00000409570 CCL23P55773 120 aa20.14■□□□□ 0.81
SCRN1-203ENST00000409570 VWCEQ96DN2 955 aa20.14■□□□□ 0.81
SCRN1-203ENST00000409570 AGBL1Q96MI9 1066 aa20.14■□□□□ 0.81
SCRN1-203ENST00000409570 TRPV6Q9H1D0 765 aa20.14■□□□□ 0.81
SCRN1-203ENST00000409570 ZNF287Q9HBT7 754 aa20.14■□□□□ 0.81
SCRN1-203ENST00000409570 RNF146Q9NTX7 359 aa20.14■□□□□ 0.81
SCRN1-203ENST00000409570 ASB14A6NK59 587 aa20.13■□□□□ 0.81
SCRN1-203ENST00000409570 DYNC1LI2O43237 492 aaPredicted RBP20.13■□□□□ 0.81
SCRN1-203ENST00000409570 B4GALT4O60513 344 aa20.13■□□□□ 0.81
SCRN1-203ENST00000409570 TDO2P48775 406 aa20.13■□□□□ 0.81
SCRN1-203ENST00000409570 RABGGTBP53611 331 aa20.13■□□□□ 0.81
SCRN1-203ENST00000409570 NEDD1Q8NHV4 660 aa20.13■□□□□ 0.81
SCRN1-203ENST00000409570 PDGFCQ9NRA1 345 aa20.13■□□□□ 0.81
SCRN1-203ENST00000409570 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
SCRN1-203ENST00000409570 M0R2C6 588 aa20.12■□□□□ 0.81
SCRN1-203ENST00000409570 RNF113AO15541 343 aaKnown RBP20.12■□□□□ 0.81
SCRN1-203ENST00000409570 STAT2P52630 851 aa20.12■□□□□ 0.81
SCRN1-203ENST00000409570 TMEM63BQ5T3F8 832 aa20.12■□□□□ 0.81
SCRN1-203ENST00000409570 TAPT1Q6NXT6 567 aa20.12■□□□□ 0.81
SCRN1-203ENST00000409570 SEZ6LQ9BYH1 1024 aa20.12■□□□□ 0.81
SCRN1-203ENST00000409570 AP5M1Q9H0R1 490 aa20.12■□□□□ 0.81
SCRN1-203ENST00000409570 TET1Q8NFU7 2136 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 MYOGP15173 224 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 GNAT2P19087 354 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 PSMC6P62333 389 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 TKFCQ3LXA3 575 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 FAM160B2Q86V87 743 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 CHURC1Q8WUH1 139 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 STAG1Q8WVM7 1258 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 TRERF1Q96PN7 1200 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 SLC4A7Q9Y6M7 1214 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 SCN10AQ9Y5Y9 1956 aa20.11■□□□□ 0.81
SCRN1-203ENST00000409570 TRIP12Q14669 1992 aaPredicted RBP20.1■□□□□ 0.81
SCRN1-203ENST00000409570 PATL2C9JE40 543 aaKnown RBP20.1■□□□□ 0.81
SCRN1-203ENST00000409570 ZEB2O60315 1214 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 APPP05067 770 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 TSPY3P0CV98 308 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 TSPY8P0CW00 308 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 ALAS1P13196 640 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 PPP2R2DQ66LE6 453 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 IQSEC1Q6DN90 963 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 EEPD1Q7L9B9 569 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 FBXO16Q8IX29 292 aaPredicted RBP20.1■□□□□ 0.81
SCRN1-203ENST00000409570 RPUSD2Q8IZ73 545 aaKnown RBP20.1■□□□□ 0.81
SCRN1-203ENST00000409570 IFNL3Q8IZI9 196 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 IL27Q8NEV9 243 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 CHMP4CQ96CF2 233 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 SCLYQ96I15 445 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 GMCL1Q96IK5 515 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 NECAB3Q96P71 396 aaPredicted RBP20.1■□□□□ 0.81
SCRN1-203ENST00000409570 ISY1Q9ULR0 285 aaKnown RBP20.1■□□□□ 0.81
SCRN1-203ENST00000409570 Q9Y3F1 56 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 PCDHA11Q9Y5I1 949 aa20.1■□□□□ 0.81
SCRN1-203ENST00000409570 PLA2G6O60733 806 aa20.09■□□□□ 0.81
SCRN1-203ENST00000409570 ZFYP08048 801 aaPredicted RBP20.09■□□□□ 0.81
SCRN1-203ENST00000409570 BMP1P13497 986 aa20.09■□□□□ 0.81
SCRN1-203ENST00000409570 TFAP4Q01664 338 aa20.09■□□□□ 0.81
SCRN1-203ENST00000409570 MUM1L1Q5H9M0 696 aa20.09■□□□□ 0.81
SCRN1-203ENST00000409570 TSHZ3Q63HK5 1081 aa20.09■□□□□ 0.81
SCRN1-203ENST00000409570 CHMP4BQ9H444 224 aaKnown RBP20.09■□□□□ 0.81
SCRN1-203ENST00000409570 CYP39A1Q9NYL5 469 aa20.09■□□□□ 0.81
SCRN1-203ENST00000409570 TANC1Q9C0D5 1861 aa20.09■□□□□ 0.81
SCRN1-203ENST00000409570 MCCP23508 829 aa20.08■□□□□ 0.81
SCRN1-203ENST00000409570 SLC1A4P43007 532 aa20.08■□□□□ 0.81
SCRN1-203ENST00000409570 SNAP25P60880 206 aa20.08■□□□□ 0.81
SCRN1-203ENST00000409570 PDE4BQ07343 736 aa20.08■□□□□ 0.81
SCRN1-203ENST00000409570 IKQ13123 557 aaPredicted RBP20.08■□□□□ 0.81
SCRN1-203ENST00000409570 MICALL1Q8N3F8 863 aa20.08■□□□□ 0.81
SCRN1-203ENST00000409570 MORC4Q8TE76 937 aa20.08■□□□□ 0.81
SCRN1-203ENST00000409570 ALDH8A1Q9H2A2 487 aaPredicted RBP20.08■□□□□ 0.81
SCRN1-203ENST00000409570 TSPYL2Q9H2G4 693 aaPredicted RBP20.08■□□□□ 0.81
SCRN1-203ENST00000409570 BRWD1Q9NSI6 2320 aa20.08■□□□□ 0.8
SCRN1-203ENST00000409570 PTPRSQ13332 1948 aa20.08■□□□□ 0.8
SCRN1-203ENST00000409570 ZBBXA8MT70 800 aa20.07■□□□□ 0.8
SCRN1-203ENST00000409570 TFF2Q03403 129 aa20.07■□□□□ 0.8
SCRN1-203ENST00000409570 TTLL4Q14679 1199 aa20.07■□□□□ 0.8
SCRN1-203ENST00000409570 KCTD1Q719H9 257 aa20.07■□□□□ 0.8
SCRN1-203ENST00000409570 PURBQ96QR8 312 aaKnown RBP20.07■□□□□ 0.8
SCRN1-203ENST00000409570 SEC62Q99442 399 aaKnown RBP20.07■□□□□ 0.8
SCRN1-203ENST00000409570 VTA1Q9NP79 307 aa20.07■□□□□ 0.8
SCRN1-203ENST00000409570 ATP2A2P16615 1042 aaKnown RBP20.06■□□□□ 0.8
SCRN1-203ENST00000409570 RCSD1Q6JBY9 416 aa20.06■□□□□ 0.8
SCRN1-203ENST00000409570 KIAA1211Q6ZU35 1233 aa20.06■□□□□ 0.8
SCRN1-203ENST00000409570 RASGRP2Q7LDG7 609 aa20.06■□□□□ 0.8
SCRN1-203ENST00000409570 TRMT13Q9NUP7 481 aaKnown RBP20.06■□□□□ 0.8
SCRN1-203ENST00000409570 PRR12Q9ULL5 1215 aa20.06■□□□□ 0.8
SCRN1-203ENST00000409570 RFXAPO00287 272 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms