RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 CSRNP1Q96S65 589 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 SPTLC3Q9NUV7 552 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 RASAL2Q9UJF2 1139 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 TUBB4BP68371 445 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 VWA3BQ502W6 1294 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 USP49Q70CQ1 688 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 A0A1W2PRG0 241 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 EFCAB8A8MWE9 144 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 CXCR5P32302 372 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 PLA2G4DQ86XP0 818 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 MRRFQ96E11 262 aaKnown RBP18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 BRIP1Q9BX63 1249 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 TTLL1O95922 423 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 DAAM2Q86T65 1068 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 TMEM47Q9BQJ4 181 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 FRMPD1Q5SYB0 1578 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 TUBBP07437 444 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 PRPHP41219 470 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 MRPS25P82663 173 aaKnown RBP18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 RASSF7Q02833 373 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 GRM1Q13255 1194 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 KRT31Q15323 416 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 RPS6KA1Q15418 735 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 GALNT17Q6IS24 598 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 PEX26Q7Z412 305 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 DHX40Q8IX18 779 aaKnown RBP18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 MICALL1Q8N3F8 863 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 GOLGA6BA6NDN3 693 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 EBAG9O00559 213 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 RPS6KA4O75676 772 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 KMT5BQ4FZB7 885 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 ZNF658Q5TYW1 1059 aaPredicted RBP18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 PAXIP1Q6ZW49 1069 aaPredicted RBP18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 DPF2Q92785 391 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 P2RX5Q93086 422 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 KCNF1Q9H3M0 494 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 AFAP1L1Q8TED9 768 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 PICK1Q9NRD5 415 aa18.22■□□□□ 0.51
PTPRN2-205ENST00000409483 USP17L5A8MUK1 530 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 SMTNP53814 917 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 STAG2Q8N3U4 1231 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 HAUS4Q9H6D7 363 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 DDX41Q9UJV9 622 aaKnown RBP18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 GOLGA6CA6NDK9 693 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 HGSO14964 777 aaPredicted RBP18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 TEX33O43247 280 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 GOLGA6DP0CG33 693 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 LLGL1Q15334 1064 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 TOGARAM2Q6ZUX3 1019 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 GOLGA6AQ9NYA3 693 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 KCNK3O14649 394 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 RAD17O75943 681 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 FLOT1O75955 427 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 IVLP07476 585 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 ACTN2P35609 894 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 CCDC127Q96BQ5 260 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 EPC1Q9H2F5 836 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 CLEC11AQ9Y240 323 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 POTEMA6NI47 508 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 HOXA13P31271 388 aaPredicted RBP18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 SEPT12Q8IYM1 358 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 NARFQ9UHQ1 456 aa18.21■□□□□ 0.51
PTPRN2-205ENST00000409483 BBOX1O75936 387 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 NAA35Q5VZE5 725 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 SARM1Q6SZW1 724 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 NLGN1Q8N2Q7 840 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 EPB41L4AQ9HCS5 686 aaPredicted RBP18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 PREX1Q8TCU6 1659 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 CLIC2O15247 247 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 POLD1P28340 1107 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 CFAP221Q4G0U5 840 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 FAM178BQ8IXR5 827 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 ALDH8A1Q9H2A2 487 aaPredicted RBP18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 EHHADHQ08426 723 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 MIGA2Q7L4E1 593 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 CPLX4Q7Z7G2 160 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 IGDCC4Q8TDY8 1250 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 AMNQ9BXJ7 453 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 DISC1Q9NRI5 854 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 CDC23Q9UJX2 597 aa18.2■□□□□ 0.5
PTPRN2-205ENST00000409483 FBXO38Q6PIJ6 1188 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 MIER3Q7Z3K6 550 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 NIM1KQ8IY84 436 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 KCNK9Q9NPC2 374 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 USTQ9Y2C2 406 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 KDM3AQ9Y4C1 1321 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 CSF1RP07333 972 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 NR2F2P24468 414 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 MNAT1P51948 309 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 DGKHQ86XP1 1220 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 VWDEQ8N2E2 1590 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 CALCOCO2Q13137 446 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 SGMS1Q86VZ5 419 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 METTL16Q86W50 562 aaKnown RBP18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 TRIM58Q8NG06 486 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 TMEM260Q9NX78 707 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 TECPR2O15040 1411 aa18.19■□□□□ 0.5
PTPRN2-205ENST00000409483 TUBB2AQ13885 445 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms