RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 NAPBQ9H115 298 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 JADE2Q9NQC1 790 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 MBD4O95243 580 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
LIMS2-205ENST00000409455 SND1Q7KZF4 910 aaKnown RBP eCLIP17.24■□□□□ 0.35
LIMS2-205ENST00000409455 CMTR1Q8N1G2 835 aaKnown RBP17.24■□□□□ 0.35
LIMS2-205ENST00000409455 FLAD1Q8NFF5 587 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 RBM17Q96I25 401 aaKnown RBP17.24■□□□□ 0.35
LIMS2-205ENST00000409455 RUFY1Q96T51 708 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 ARMT1Q9H993 441 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 A0A1B0GUL6 1792 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 PNPLA7Q6ZV29 1317 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 IDEP14735 1019 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 CTDSPL2Q05D32 466 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 C2orf54Q08AI8 447 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 KCNV1Q6PIU1 500 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 RUBCNQ92622 972 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 STAMQ92783 540 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 EHD4Q9H223 541 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 BLZF1Q9H2G9 400 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 RABEP2Q9H5N1 569 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 CXorf56Q9H5V9 222 aa17.24■□□□□ 0.35
LIMS2-205ENST00000409455 ATXN2Q99700 1313 aaKnown RBP17.23■□□□□ 0.35
LIMS2-205ENST00000409455 IRS2Q9Y4H2 1338 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 KLRG2A4D1S0 409 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-205ENST00000409455 PES1O00541 588 aaKnown RBP17.23■□□□□ 0.35
LIMS2-205ENST00000409455 KIAA0754O94854 1291 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 CYLC1P35663 651 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-205ENST00000409455 EN1Q05925 392 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-205ENST00000409455 ALX1Q15699 326 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 MFSD6Q6ZSS7 791 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-205ENST00000409455 B4GALNT4Q76KP1 1039 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 CNPY4Q8N129 248 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 MIGA1Q8NAN2 632 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 TFR2Q9UP52 801 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 LEMD3Q9Y2U8 911 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 XDHP47989 1333 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 ZNF185O15231 689 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 CHRM1P11229 460 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-205ENST00000409455 EZH2Q15910 746 aaKnown RBP17.23■□□□□ 0.35
LIMS2-205ENST00000409455 AKNAD1Q5T1N1 836 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 ADGRA1Q86SQ6 560 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 FBXO41Q8TF61 875 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 SH3GL2Q99962 352 aa17.23■□□□□ 0.35
LIMS2-205ENST00000409455 PATL2C9JE40 543 aaKnown RBP17.22■□□□□ 0.35
LIMS2-205ENST00000409455 NDUFAB1O14561 156 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 CYP7A1P22680 504 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 HOXA10P31260 410 aaPredicted RBP17.22■□□□□ 0.35
LIMS2-205ENST00000409455 KRT2P35908 639 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 RRP12Q5JTH9 1297 aaKnown RBP17.22■□□□□ 0.35
LIMS2-205ENST00000409455 MB21D1Q8N884 522 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 PYM1Q9BRP8 204 aaKnown RBP17.22■□□□□ 0.35
LIMS2-205ENST00000409455 RMND1Q9NWS8 449 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 CAPN11Q9UMQ6 739 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 A0A1W2PQC6 194 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 FAM205CA6NFA0 338 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 H0YHG0 523 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 PDE2AO00408 941 aaPredicted RBP17.22■□□□□ 0.35
LIMS2-205ENST00000409455 BBOX1O75936 387 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 MMP10P09238 476 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 GPSM2P81274 684 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 ZNF658Q5TYW1 1059 aaPredicted RBP17.22■□□□□ 0.35
LIMS2-205ENST00000409455 MSL1Q68DK7 614 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 TMTC2Q8N394 836 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 LCORLQ8N3X6 602 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 PRPF38AQ8NAV1 312 aaKnown RBP17.22■□□□□ 0.35
LIMS2-205ENST00000409455 GPR101Q96P66 508 aaPredicted RBP17.22■□□□□ 0.35
LIMS2-205ENST00000409455 ZKSCAN3Q9BRR0 538 aa17.22■□□□□ 0.35
LIMS2-205ENST00000409455 ZNHIT6Q9NWK9 470 aaKnown RBP17.22■□□□□ 0.35
LIMS2-205ENST00000409455 LGALS16A8MUM7 142 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 H7C1D1 291 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 PRKAB2O43741 272 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 MMP14P50281 582 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 WDR59Q6PJI9 974 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 SPATS2Q86XZ4 545 aaKnown RBP17.21■□□□□ 0.35
LIMS2-205ENST00000409455 IFNL3Q8IZI9 196 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 FANCBQ8NB91 859 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 VPS54Q9P1Q0 977 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 JAG2Q9Y219 1238 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 SAMM50Q9Y512 469 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 GTPBP6O43824 516 aaPredicted RBP17.21■□□□□ 0.35
LIMS2-205ENST00000409455 PARP1P09874 1014 aaKnown RBP17.21■□□□□ 0.35
LIMS2-205ENST00000409455 EPB41P11171 864 aaKnown RBP17.21■□□□□ 0.35
LIMS2-205ENST00000409455 RCAN1P53805 252 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 CABS1Q96KC9 395 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 BRIP1Q9BX63 1249 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 EPB41L4AQ9HCS5 686 aaPredicted RBP17.21■□□□□ 0.35
LIMS2-205ENST00000409455 CAPN7Q9Y6W3 813 aa17.21■□□□□ 0.35
LIMS2-205ENST00000409455 GSG1L2A8MUP6 293 aa17.2■□□□□ 0.34
LIMS2-205ENST00000409455 MEA1Q16626 185 aa17.2■□□□□ 0.34
LIMS2-205ENST00000409455 TTC19Q6DKK2 380 aaPredicted RBP17.2■□□□□ 0.34
LIMS2-205ENST00000409455 MMGT1Q8N4V1 131 aa17.2■□□□□ 0.34
LIMS2-205ENST00000409455 OTUD6BQ8N6M0 293 aa17.2■□□□□ 0.34
LIMS2-205ENST00000409455 ZNF384Q8TF68 577 aa17.2■□□□□ 0.34
LIMS2-205ENST00000409455 RRP36Q96EU6 259 aaKnown RBP17.2■□□□□ 0.34
LIMS2-205ENST00000409455 CAMKK2Q96RR4 588 aa17.2■□□□□ 0.34
LIMS2-205ENST00000409455 CRAMP1Q96RY5 1269 aa17.2■□□□□ 0.34
LIMS2-205ENST00000409455 RNF26Q9BY78 433 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms