RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PDE4DIPQ5VU43 2346 aa20.89■□□□□ 0.93
PDLIM2-206ENST00000409141 NFIBO00712 420 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 SEPT4O43236 478 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 HSPA4P34932 840 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 LIFRP42702 1097 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 BAATQ14032 418 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 QRICH1Q2TAL8 776 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 ZNF654Q8IZM8 581 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 CLEC4DQ8WXI8 215 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 PAWRQ96IZ0 340 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 PLXNA1Q9UIW2 1896 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 PTPDC1A2A3K4 754 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 SOWAHBA6NEL2 793 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 DDAH1O94760 285 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 SNAI1O95863 264 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 DHX32Q7L7V1 743 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 FBXO11Q86XK2 927 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 CTCFLQ8NI51 663 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 KCNB2Q92953 911 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 FGD4Q96M96 766 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 MYL10Q9BUA6 226 aa20.88■□□□□ 0.93
PDLIM2-206ENST00000409141 SMCHD1A6NHR9 2005 aa20.87■□□□□ 0.93
PDLIM2-206ENST00000409141 ANO1Q5XXA6 986 aa20.87■□□□□ 0.93
PDLIM2-206ENST00000409141 NECAB2Q7Z6G3 386 aa20.87■□□□□ 0.93
PDLIM2-206ENST00000409141 DIS3LQ8TF46 1054 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-206ENST00000409141 MAP3K14Q99558 947 aa20.87■□□□□ 0.93
PDLIM2-206ENST00000409141 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.87■□□□□ 0.93
PDLIM2-206ENST00000409141 ABCB11O95342 1321 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 ASB14A6NK59 587 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 HMGB1P09429 215 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 ZNF865P0CJ78 1059 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 KIF5BP33176 963 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 EXOSC10Q01780 885 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 RNF207Q6ZRF8 634 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 ARMCX2Q7L311 632 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 CCDC144CPQ8IYA2 1237 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 TCEANC2Q96MN5 208 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 HTATIP2Q9BUP3 242 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 RIOX1Q9H6W3 641 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 ZHX1Q9UKY1 873 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 SNX14Q9Y5W7 946 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 SLC12A7Q9Y666 1083 aa20.86■□□□□ 0.93
PDLIM2-206ENST00000409141 ZBTB5O15062 677 aa20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 TNRC18O15417 2968 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 CALM1P0DP23 149 aa20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 CALM2P0DP24 149 aa20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 CALM3P0DP25 149 aa20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 CALML3P27482 149 aa20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 MNX1P50219 401 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 HOMER1Q86YM7 354 aa20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 MTMR8Q96EF0 704 aa20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 PURBQ96QR8 312 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 AMNQ9BXJ7 453 aa20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 ABHD16BQ9H3Z7 469 aa20.85■□□□□ 0.93
PDLIM2-206ENST00000409141 EPB41L2O43491 1005 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 ACVR2BQ13705 512 aa20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 SLC35G1Q2M3R5 365 aa20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 SYNE3Q6ZMZ3 975 aa20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 RGS22Q8NE09 1264 aa20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 DPF3Q92784 378 aa20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 JAKMIP1Q96N16 626 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 PIGSQ96S52 555 aa20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 ADD3Q9UEY8 706 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 FAM184BQ9ULE4 1060 aa20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 MRPL11Q9Y3B7 192 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-206ENST00000409141 MYCNP04198 464 aaPredicted RBP20.83■□□□□ 0.93
PDLIM2-206ENST00000409141 RARBP10826 455 aa20.83■□□□□ 0.93
PDLIM2-206ENST00000409141 AKR1A1P14550 325 aa20.83■□□□□ 0.93
PDLIM2-206ENST00000409141 RXRAP19793 462 aa20.83■□□□□ 0.93
PDLIM2-206ENST00000409141 RPS6P62753 249 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-206ENST00000409141 SLC30A10Q6XR72 485 aa20.83■□□□□ 0.93
PDLIM2-206ENST00000409141 SGMS1Q86VZ5 419 aa20.83■□□□□ 0.93
PDLIM2-206ENST00000409141 ARRDC4Q8NCT1 418 aa20.83■□□□□ 0.93
PDLIM2-206ENST00000409141 USP26Q9BXU7 913 aa20.83■□□□□ 0.93
PDLIM2-206ENST00000409141 C11orf49Q9H6J7 331 aa20.83■□□□□ 0.93
PDLIM2-206ENST00000409141 ASTN1O14525 1302 aa20.83■□□□□ 0.92
PDLIM2-206ENST00000409141 CYTH3O43739 400 aa20.82■□□□□ 0.92
PDLIM2-206ENST00000409141 CPA1P15085 419 aa20.82■□□□□ 0.92
PDLIM2-206ENST00000409141 GNAQP50148 359 aa20.82■□□□□ 0.92
PDLIM2-206ENST00000409141 FGD1P98174 961 aa20.82■□□□□ 0.92
PDLIM2-206ENST00000409141 MCF2L2Q86YR7 1114 aa20.82■□□□□ 0.92
PDLIM2-206ENST00000409141 RAB11FIP4Q86YS3 637 aa20.82■□□□□ 0.92
PDLIM2-206ENST00000409141 PIBF1Q8WXW3 757 aa20.82■□□□□ 0.92
PDLIM2-206ENST00000409141 LZTS2Q9BRK4 669 aa20.82■□□□□ 0.92
PDLIM2-206ENST00000409141 PCDHA1Q9Y5I3 950 aa20.82■□□□□ 0.92
PDLIM2-206ENST00000409141 PNMA6FA0A0J9YX94 578 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 PPP1R11O60927 126 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 TRAF1Q13077 416 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 GJC2Q5T442 439 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 FANCBQ8NB91 859 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 TBC1D5Q92609 795 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 MAF1Q9H063 256 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 XPNPEP3Q9NQH7 507 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 DDX49Q9Y6V7 483 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 PSMA5P28066 241 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 SMARCA1P28370 1054 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 ALDH5A1P51649 535 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 CCDC144BQ3MJ40 725 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 BLOC1S2Q6QNY1 142 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 MICU3Q86XE3 530 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms