RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 CCDC129Q6ZRS4 1044 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 ANKRD35Q8N283 1001 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 GMCL1P1Q8NEA9 526 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 NEDD1Q8NHV4 660 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 LENG1Q96BZ8 264 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 SEC62Q99442 399 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 NACAP1Q9BZK3 213 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 RAVER2Q9HCJ3 691 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 ARIH1Q9Y4X5 557 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 KIAA0355O15063 1070 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 DUSP11O75319 330 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 SLC3A2P08195 630 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 TSPY3P0CV98 308 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 TSPY8P0CW00 308 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 FDX1P10109 184 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 BMP3P12645 472 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 ACLYP53396 1101 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 OAZ1P54368 228 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 TFAP4Q01664 338 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 ACVR2BQ13705 512 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 KCNA10Q16322 511 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 TMEM31Q5JXX7 168 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 LRRC47Q8N1G4 583 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 KLHDC9Q8NEP7 349 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 CHST13Q8NET6 341 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 PI4K2BQ8TCG2 481 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 NUP133Q8WUM0 1156 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 MS4A3Q96HJ5 214 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 TOX2Q96NM4 488 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 TMEM39AQ9NV64 488 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 FBXO40Q9UH90 709 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 ZHX1Q9UKY1 873 aaPredicted RBP10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 PCDHB15Q9Y5E8 787 aa10.9□□□□□ -0.66
NIF3L1-203ENST00000409129 SYNRGQ9UMZ2 1314 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 MOXD2PA6NHM9 499 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 DCDC2CA8MYV0 355 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 TMEM232C9JQI7 657 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 PPARAQ07869 468 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 FAAP100Q0VG06 881 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 ZMYM1Q5SVZ6 1142 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 CCSAPQ6IQ19 270 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 C16orf59Q7L2K0 433 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 ANKRD33Q7Z3H0 272 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 OTUD7AQ8TE49 926 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 CHURC1Q8WUH1 139 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 FSD1Q9BTV5 496 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 NAPBQ9H115 298 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 NKX2-4Q9H2Z4 354 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 ABHD16BQ9H3Z7 469 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 STARD7Q9NQZ5 370 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 CXXC1Q9P0U4 656 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 PLIN4Q96Q06 1357 aa10.89□□□□□ -0.67
NIF3L1-203ENST00000409129 SCN5AQ14524 2016 aa10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 CCDC144BQ3MJ40 725 aa10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 ARMCX2Q7L311 632 aa10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 FAM160B2Q86V87 743 aa10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 PCSK9Q8NBP7 692 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 STAG1Q8WVM7 1258 aa10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 FGD4Q96M96 766 aa10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 SPC25Q9HBM1 224 aa10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 TSHZ2Q9NRE2 1034 aa10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 HOMER2Q9NSB8 354 aa10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 YBX2Q9Y2T7 364 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-203ENST00000409129 ELP1O95163 1332 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 MYADML2A6NDP7 307 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 ADCY6O43306 1168 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 PLA2G6O60733 806 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 ASGR1P07306 291 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 C6orf222P0C671 652 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 ACRP10323 421 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 MX1P20591 662 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 MCCP23508 829 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 CST5P28325 142 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 SLC1A4P43007 532 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 MRE11P49959 708 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 CDK7P50613 346 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 STAT2P52630 851 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 GJA9P57773 515 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 IRX5P78411 483 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 CNTN2Q02246 1040 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 PPP4R3BQ5MIZ7 849 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 TMEM240Q5SV17 173 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 CCDC144CPQ8IYA2 1237 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 AGBL1Q96MI9 1066 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 GLT1D1Q96MS3 346 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 UPF3AQ9H1J1 476 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 ACAD9Q9H845 621 aa10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 ISY1Q9ULR0 285 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-203ENST00000409129 ZNF536O15090 1300 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 MYH4Q9Y623 1939 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 TSPY2A6NKD2 308 aa10.86□□□□□ -0.67
NIF3L1-203ENST00000409129 FOXP2O15409 715 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms