RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ZSCAN10Q96SZ4 725 aaPredicted RBP22.64■■□□□ 1.22
SMARCB1-204ENST00000407422 CPVLQ9H3G5 476 aa22.64■■□□□ 1.22
SMARCB1-204ENST00000407422 A0A1W2PQ45 241 aaPredicted RBP22.64■■□□□ 1.21
SMARCB1-204ENST00000407422 A0A1W2PQY0 241 aa22.64■■□□□ 1.21
SMARCB1-204ENST00000407422 NFIBO00712 420 aa22.64■■□□□ 1.21
SMARCB1-204ENST00000407422 CHMLP26374 656 aa22.64■■□□□ 1.21
SMARCB1-204ENST00000407422 TDHQ8IZJ6 230 aa22.64■■□□□ 1.21
SMARCB1-204ENST00000407422 ENAHQ8N8S7 591 aaPredicted RBP22.64■■□□□ 1.21
SMARCB1-204ENST00000407422 LRRC37A2A6NM11 1700 aa22.63■■□□□ 1.21
SMARCB1-204ENST00000407422 NT5C2P49902 561 aa22.63■■□□□ 1.21
SMARCB1-204ENST00000407422 KCNA10Q16322 511 aa22.63■■□□□ 1.21
SMARCB1-204ENST00000407422 C1orf53Q5VUE5 145 aa22.63■■□□□ 1.21
SMARCB1-204ENST00000407422 CCSAPQ6IQ19 270 aaPredicted RBP22.63■■□□□ 1.21
SMARCB1-204ENST00000407422 PNMA1Q8ND90 353 aa22.63■■□□□ 1.21
SMARCB1-204ENST00000407422 ANKS1AQ92625 1134 aa22.63■■□□□ 1.21
SMARCB1-204ENST00000407422 PRDM5Q9NQX1 630 aaPredicted RBP22.63■■□□□ 1.21
SMARCB1-204ENST00000407422 PRKAG2Q9UGJ0 569 aa22.63■■□□□ 1.21
SMARCB1-204ENST00000407422 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 ASB14A6NK59 587 aa22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 ACLYP53396 1101 aa22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 PTH1RQ03431 593 aa22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 TLE2Q04725 743 aa22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 BAATQ14032 418 aaPredicted RBP22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 SH3RF1Q7Z6J0 888 aa22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 TSEN34Q9BSV6 310 aaKnown RBP22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 UBA5Q9GZZ9 404 aa22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 RAD50Q92878 1312 aa22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 COL6A3P12111 3177 aa22.62■■□□□ 1.21
SMARCB1-204ENST00000407422 C6orf222P0C671 652 aaPredicted RBP22.61■■□□□ 1.21
SMARCB1-204ENST00000407422 CCDC178Q5BJE1 867 aa22.61■■□□□ 1.21
SMARCB1-204ENST00000407422 GPATCH4Q5T3I0 446 aaKnown RBP22.61■■□□□ 1.21
SMARCB1-204ENST00000407422 CLEC4DQ8WXI8 215 aa22.61■■□□□ 1.21
SMARCB1-204ENST00000407422 LBHD1Q9BQE6 289 aaPredicted RBP22.61■■□□□ 1.21
SMARCB1-204ENST00000407422 KRT23Q9C075 422 aa22.61■■□□□ 1.21
SMARCB1-204ENST00000407422 KAT14Q9H8E8 782 aa22.61■■□□□ 1.21
SMARCB1-204ENST00000407422 PDLIM7Q9NR12 457 aa22.61■■□□□ 1.21
SMARCB1-204ENST00000407422 TNKSO95271 1327 aa22.61■■□□□ 1.21
SMARCB1-204ENST00000407422 PTGS1P23219 599 aa22.6■■□□□ 1.21
SMARCB1-204ENST00000407422 EEPD1Q7L9B9 569 aa22.6■■□□□ 1.21
SMARCB1-204ENST00000407422 CNNM2Q9H8M5 875 aa22.6■■□□□ 1.21
SMARCB1-204ENST00000407422 TRIM43BA6NCK2 446 aa22.6■■□□□ 1.21
SMARCB1-204ENST00000407422 GJA9P57773 515 aa22.6■■□□□ 1.21
SMARCB1-204ENST00000407422 RUFY2Q8WXA3 655 aa22.6■■□□□ 1.21
SMARCB1-204ENST00000407422 TRIM43Q96BQ3 446 aaPredicted RBP22.6■■□□□ 1.21
SMARCB1-204ENST00000407422 UPF3AQ9H1J1 476 aaKnown RBP22.6■■□□□ 1.21
SMARCB1-204ENST00000407422 PDGFCQ9NRA1 345 aa22.6■■□□□ 1.21
SMARCB1-204ENST00000407422 MYH6P13533 1939 aa22.6■■□□□ 1.21
SMARCB1-204ENST00000407422 PTPDC1A2A3K4 754 aa22.59■■□□□ 1.21
SMARCB1-204ENST00000407422 MOXD2PA6NHM9 499 aa22.59■■□□□ 1.21
SMARCB1-204ENST00000407422 CTAGE5O15320 804 aa22.59■■□□□ 1.21
SMARCB1-204ENST00000407422 CST5P28325 142 aaPredicted RBP22.59■■□□□ 1.21
SMARCB1-204ENST00000407422 TNFAIP2Q03169 654 aa22.59■■□□□ 1.21
SMARCB1-204ENST00000407422 SLC30A10Q6XR72 485 aa22.59■■□□□ 1.21
SMARCB1-204ENST00000407422 FBXO16Q8IX29 292 aaPredicted RBP22.59■■□□□ 1.21
SMARCB1-204ENST00000407422 STARD7Q9NQZ5 370 aa22.59■■□□□ 1.21
SMARCB1-204ENST00000407422 WDR19Q8NEZ3 1342 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 PQBP1O60828 265 aaKnown RBP22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 ASGR1P07306 291 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 LRIT3Q3SXY7 679 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 GNASQ5JWF2 1037 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 TMEM63BQ5T3F8 832 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 TAPT1Q6NXT6 567 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 NOL8Q76FK4 1167 aaKnown RBP22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 CYB5R4Q7L1T6 521 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 NUP133Q8WUM0 1156 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 UBAC1Q9BSL1 405 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 SPC25Q9HBM1 224 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 TAF6LQ9Y6J9 622 aa22.58■■□□□ 1.21
SMARCB1-204ENST00000407422 CYP21A2P08686 494 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 CALML3P27482 149 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 USH1GQ495M9 461 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 MORC4Q8TE76 937 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 BADQ92934 168 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 GNEQ9Y223 722 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 SGSM2O43147 1006 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 SMPD1P17405 629 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 ITGB8P26012 769 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 ALDH5A1P51649 535 aaPredicted RBP22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 BEX3Q00994 111 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 RNF207Q6ZRF8 634 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 ADGRF4Q8IZF3 695 aa22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 PCSK9Q8NBP7 692 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-204ENST00000407422 CLTBP09497 229 aa22.56■■□□□ 1.2
SMARCB1-204ENST00000407422 RPS6P62753 249 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-204ENST00000407422 SEC23AQ15436 765 aa22.56■■□□□ 1.2
SMARCB1-204ENST00000407422 CDC37Q16543 378 aaPredicted RBP22.56■■□□□ 1.2
SMARCB1-204ENST00000407422 ASPRV1Q53RT3 343 aa22.56■■□□□ 1.2
SMARCB1-204ENST00000407422 IFIT1BQ5T764 474 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-204ENST00000407422 ADD3Q9UEY8 706 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-204ENST00000407422 PNMA2Q9UL42 364 aa22.56■■□□□ 1.2
SMARCB1-204ENST00000407422 PARP1P09874 1014 aaKnown RBP22.55■■□□□ 1.2
SMARCB1-204ENST00000407422 TLK2Q86UE8 772 aa22.55■■□□□ 1.2
SMARCB1-204ENST00000407422 GLT1D1Q96MS3 346 aa22.55■■□□□ 1.2
SMARCB1-204ENST00000407422 U3KPZ7 1027 aaPredicted RBP22.55■■□□□ 1.2
SMARCB1-204ENST00000407422 NKX3-2P78367 333 aa22.54■■□□□ 1.2
SMARCB1-204ENST00000407422 FAAP100Q0VG06 881 aa22.54■■□□□ 1.2
SMARCB1-204ENST00000407422 ANKRD33Q7Z3H0 272 aa22.54■■□□□ 1.2
SMARCB1-204ENST00000407422 STAG2Q8N3U4 1231 aa22.54■■□□□ 1.2
SMARCB1-204ENST00000407422 VTA1Q9NP79 307 aa22.54■■□□□ 1.2
SMARCB1-204ENST00000407422 ELP1O95163 1332 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms