RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 BRF1Q92994 677 aa11.96□□□□□ -0.49
TSPAN9-202ENST00000407263 DDX11Q96FC9 970 aa11.96□□□□□ -0.49
TSPAN9-202ENST00000407263 MAML3Q96JK9 1138 aa11.96□□□□□ -0.49
TSPAN9-202ENST00000407263 PIGSQ96S52 555 aa11.96□□□□□ -0.49
TSPAN9-202ENST00000407263 TMEM106CQ9BVX2 250 aa11.96□□□□□ -0.49
TSPAN9-202ENST00000407263 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.96□□□□□ -0.49
TSPAN9-202ENST00000407263 RNF208Q9H0X6 261 aa11.96□□□□□ -0.49
TSPAN9-202ENST00000407263 FBXO40Q9UH90 709 aa11.96□□□□□ -0.49
TSPAN9-202ENST00000407263 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.49
TSPAN9-202ENST00000407263 PTPDC1A2A3K4 754 aa11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 GOLGA8AA7E2F4 631 aa11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 CYTH3O43739 400 aa11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 PPP1R11O60927 126 aaPredicted RBP11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 HOXC6P09630 235 aa11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 PSMA5P28066 241 aa11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 CCND3P30281 292 aaPredicted RBP11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 KIF5BP33176 963 aa11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 CACNB2Q08289 660 aaPredicted RBP11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 SYNE3Q6ZMZ3 975 aa11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 FBXO11Q86XK2 927 aa11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 SLC5A4Q9NY91 659 aa11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 DDX49Q9Y6V7 483 aaKnown RBP11.95□□□□□ -0.5
TSPAN9-202ENST00000407263 PFASO15067 1338 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 ABCB11O95342 1321 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 CNTNAP5Q8WYK1 1306 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 ZBTB43O43298 467 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 CALM1P0DP23 149 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 CALM2P0DP24 149 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 CALM3P0DP25 149 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 CALML3P27482 149 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 RTN1Q16799 776 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 ZNF792Q3KQV3 632 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 MFSD14CQ5VZR4 134 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 RUFY3Q7L099 469 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 TRMT44Q8IYL2 757 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 TMTC2Q8N394 836 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 CLEC4DQ8WXI8 215 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 FGD4Q96M96 766 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 DEFB118Q96PH6 123 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 PURBQ96QR8 312 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 LARP6Q9BRS8 491 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 CYP46A1Q9Y6A2 500 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 MYH7BA7E2Y1 1941 aa11.94□□□□□ -0.5
TSPAN9-202ENST00000407263 BRCA2P51587 3418 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 ASTN1O14525 1302 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 DNAJC25-GNG10A0A024R161 153 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 hCG_1642624A0A1W2PR95 340 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 ZBTB5O15062 677 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 EN2P19622 333 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 CNGA1P29973 690 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 CNTN2Q02246 1040 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 MAP3K21Q5TCX8 1036 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 OLFML2BQ68BL8 750 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 TMTC3Q6ZXV5 915 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 NOL8Q76FK4 1167 aaKnown RBP11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 CCDC82Q8N4S0 544 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 SRBD1Q8N5C6 995 aaKnown RBP11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 TRPV1Q8NER1 839 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 SHISA4Q96DD7 197 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 RIOX1Q9H6W3 641 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 HMX1Q9NP08 348 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 CYP39A1Q9NYL5 469 aa11.93□□□□□ -0.5
TSPAN9-202ENST00000407263 RPTORQ8N122 1335 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 CYBAP13498 195 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 CDC27P30260 824 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 METAP2P50579 478 aaKnown RBP eCLIP11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 BAATQ14032 418 aaPredicted RBP11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 TOB2Q14106 344 aaPredicted RBP11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 PRAMEF19Q5SWL8 479 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 ANO1Q5XXA6 986 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 RNF207Q6ZRF8 634 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 FAM133AQ8N9E0 248 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 FANCBQ8NB91 859 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 MTMR8Q96EF0 704 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 RRP36Q96EU6 259 aaKnown RBP11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 MAP3K14Q99558 947 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 TINF2Q9BSI4 451 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 SPZ1Q9BXG8 430 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 AMNQ9BXJ7 453 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 PAK6Q9NQU5 681 aaPredicted RBP11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 PDRG1Q9NUG6 133 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 SEC63Q9UGP8 760 aaKnown RBP11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 PNMA2Q9UL42 364 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 NID2Q14112 1375 aa11.92□□□□□ -0.5
TSPAN9-202ENST00000407263 SOWAHBA6NEL2 793 aa11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 PPFIA3O75145 1194 aa11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 GNAQP50148 359 aa11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 ANAPC15P60006 121 aa11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 RPS6P62753 249 aaKnown RBP11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 ARMCX2Q7L311 632 aa11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 U2AF1L4Q8WU68 220 aaKnown RBP11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 GPKOWQ92917 476 aaPredicted RBP eCLIP11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 LENG1Q96BZ8 264 aaPredicted RBP11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 TM6SF1Q9BZW5 370 aa11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 RBM28Q9NW13 759 aaKnown RBP11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 ZHX1Q9UKY1 873 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms