RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 FAM153CQ494X1 144 aa24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 USP49Q70CQ1 688 aa24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 RETREG2Q8NC44 543 aa24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 ZNF507Q8TCN5 953 aa24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 TMX4Q9H1E5 349 aaPredicted RBP24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 FAM153AQ9UHL3 310 aa24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 A6NHS1 94 aa24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 MATR3P43243 847 aaKnown RBP eCLIP24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 PPP1R7Q15435 360 aa24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 APOA5Q6Q788 366 aa24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 DDX17Q92841 729 aaKnown RBP24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 OSBP2Q969R2 916 aa24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 TAF1DQ9H5J8 278 aaPredicted RBP24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 DUSP10Q9Y6W6 482 aa24.76■■□□□ 1.55
CUEDC1-202ENST00000407144 H7C1D1 291 aa24.75■■□□□ 1.55
CUEDC1-202ENST00000407144 NEXNQ0ZGT2 675 aa24.75■■□□□ 1.55
CUEDC1-202ENST00000407144 CCDC63Q8NA47 563 aa24.75■■□□□ 1.55
CUEDC1-202ENST00000407144 ZNF570Q96NI8 536 aa24.75■■□□□ 1.55
CUEDC1-202ENST00000407144 NDST4Q9H3R1 872 aa24.75■■□□□ 1.55
CUEDC1-202ENST00000407144 DDX21Q9NR30 783 aaKnown RBP eCLIP24.75■■□□□ 1.55
CUEDC1-202ENST00000407144 CCT8L1PA6NM43 557 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 BTBD18B2RXH4 712 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 GCOM1H8Y6P7 765 aaPredicted RBP24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 LUC7L3O95232 432 aaKnown RBP24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 MYZAPP0CAP1 466 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 NEFHP12036 1026 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 ZNF268Q14587 947 aaPredicted RBP24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 SH2D4AQ9H788 454 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 SLC12A4Q9UP95 1085 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 PLAAQ9Y263 795 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 RANBP6O60518 1105 aaKnown RBP24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 RTN3O95197 1032 aaPredicted RBP24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 GLI1P08151 1106 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 SLC30A9Q6PML9 568 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 DIS3L2Q8IYB7 885 aaKnown RBP24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 TTYH3Q9C0H2 523 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 SLC5A4Q9NY91 659 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 PCDHB6Q9Y5E3 794 aa24.74■■□□□ 1.55
CUEDC1-202ENST00000407144 A0A087X0B3 334 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 ZNF213O14771 459 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 TRIM37O94972 964 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 HPDP32754 393 aaPredicted RBP24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 SSRP1Q08945 709 aaKnown RBP24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 AGBL2Q5U5Z8 902 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 RUFY4Q6ZNE9 571 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 ANKRD27Q96NW4 1050 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 ALS2CR12Q96Q35 445 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 RBM12Q9NTZ6 932 aaKnown RBP24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 IRAK4Q9NWZ3 460 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 SWAP70Q9UH65 585 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 NUTM2BA6NNL0 878 aaPredicted RBP24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 NUTM2EB1AL46 878 aaPredicted RBP24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 FMNL1O95466 1100 aaPredicted RBP24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 FERP16591 822 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 RRAGBQ5VZM2 374 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 MAATS1Q7Z4T9 603 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 EPB41L5Q9HCM4 733 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 TSKSQ9UJT2 592 aa24.73■■□□□ 1.55
CUEDC1-202ENST00000407144 PDS5AQ29RF7 1337 aaKnown RBP24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 ORC4O43929 436 aa24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 HEXIM1O94992 359 aaKnown RBP24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 ZFYP08048 801 aaPredicted RBP24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 EEF1GP26641 437 aaKnown RBP24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 PPP2R2AP63151 447 aa24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 MRPS25P82663 173 aaKnown RBP24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 ZBED6P86452 979 aa24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 SPA17Q15506 151 aa24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 CWF19L1Q69YN2 538 aaKnown RBP24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 APLFQ8IW19 511 aaPredicted RBP24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 RAPGEF5Q92565 580 aa24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 PSMD1Q99460 953 aa24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 CAPN6Q9Y6Q1 641 aa24.72■■□□□ 1.55
CUEDC1-202ENST00000407144 ZBTB43O43298 467 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 PARP1P09874 1014 aaKnown RBP24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 DRD4P21917 467 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 CFAP221Q4G0U5 840 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 ESCO1Q5FWF5 840 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 NELFBQ8WX92 580 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 LMO7Q8WWI1 1683 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 DNM2P50570 870 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 THEMIS2Q5TEJ8 643 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 NFRKBQ6P4R8 1299 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 RIC3Q7Z5B4 369 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 PCDHGC5Q9Y5F6 944 aa24.71■■□□□ 1.55
CUEDC1-202ENST00000407144 TMEM87BQ96K49 555 aa24.7■■□□□ 1.55
CUEDC1-202ENST00000407144 KCNMB3Q9NPA1 279 aa24.7■■□□□ 1.55
CUEDC1-202ENST00000407144 FAM217BQ9NTX9 383 aaPredicted RBP24.7■■□□□ 1.55
CUEDC1-202ENST00000407144 LINGO3P0C6S8 592 aa24.7■■□□□ 1.54
CUEDC1-202ENST00000407144 CCND1P24385 295 aa24.7■■□□□ 1.54
CUEDC1-202ENST00000407144 CASP1P29466 404 aa24.7■■□□□ 1.54
CUEDC1-202ENST00000407144 CCNG1P51959 295 aa24.7■■□□□ 1.54
CUEDC1-202ENST00000407144 ROR2Q01974 943 aaKnown RBP24.7■■□□□ 1.54
CUEDC1-202ENST00000407144 GUCY2DQ02846 1103 aa24.7■■□□□ 1.54
CUEDC1-202ENST00000407144 CPLX4Q7Z7G2 160 aa24.7■■□□□ 1.54
CUEDC1-202ENST00000407144 CENPTQ96BT3 561 aa24.7■■□□□ 1.54
CUEDC1-202ENST00000407144 LRWD1Q9UFC0 647 aa24.7■■□□□ 1.54
CUEDC1-202ENST00000407144 H0YGN5 161 aa24.69■■□□□ 1.54
CUEDC1-202ENST00000407144 IFIT1P09914 478 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms