RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 BACE2Q9Y5Z0 518 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 LRRN2O75325 713 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 CBX7O95931 251 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 CDKN1CP49918 316 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 SCRN1Q12765 414 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 E4F1Q66K89 784 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 IQCEQ6IPM2 695 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 TMC3Q7Z5M5 1100 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 NECAB2Q7Z6G3 386 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 JAMLQ86YT9 394 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 LEO1Q8WVC0 666 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 JDP2Q8WYK2 163 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 MEGF10Q96KG7 1140 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 GPR62Q9BZJ7 368 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 GPATCH2Q9NW75 528 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 TCEAL9Q9UHQ7 104 aa6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 TNPO3Q9Y5L0 923 aaKnown RBP6.46□□□□□ -1.38
HMGB3P18-201ENST00000406327 FAM155AB1AL88 458 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 H0Y8X5 98 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 MEFVO15553 781 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 CD3EP07766 207 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 BMP8BP34820 402 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 SEPHS1P49903 392 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 KCNAB2Q13303 367 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 LRP8Q14114 963 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 DPY19L1Q2PZI1 675 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 CFAP100Q494V2 611 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 EEF1DP3Q658K8 133 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 ARHGAP27Q6ZUM4 889 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 ZAR1Q86SH2 424 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 DDX53Q86TM3 631 aaKnown RBP6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 MTDHQ86UE4 582 aaKnown RBP6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 PPIL6Q8IXY8 311 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 UBR7Q8N806 425 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 OR2W6PQ8NHA6 318 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 COPS5Q92905 334 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 C1orf159Q96HA4 380 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 Q96M66 194 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 TBC1D32Q96NH3 1257 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 HDAC8Q9BY41 377 aa6.45□□□□□ -1.38
HMGB3P18-201ENST00000406327 C2orf71A6NGG8 1288 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 MEIS1O00470 390 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 AURKAO14965 403 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 VAMP4O75379 141 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 LEFTY1O75610 366 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 JMJD7P0C870 316 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 POU3F3P20264 500 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 SART3Q15020 963 aaKnown RBP6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 TESK1Q15569 626 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 NTRK3Q16288 839 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 RNF219Q5W0B1 726 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 KIF18BQ86Y91 864 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 IFNL3Q8IZI9 196 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 PANK1Q8TE04 598 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 USP7Q93009 1102 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 TTC1Q99614 292 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 ALG1Q9BT22 464 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 GPR27Q9NS67 375 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 CAPN6Q9Y6Q1 641 aa6.44□□□□□ -1.38
HMGB3P18-201ENST00000406327 SSU72P8A0A1W2PR75 194 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 TCRBV16S1A1N1A0A5B0 115 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 BLACEA4D250 179 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 STXBP3O00186 592 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 PARNO95453 639 aaKnown RBP6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 CRTAMO95727 393 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 LTBRP36941 435 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 PCBP3P57721 371 aaKnown RBP6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 GPR85P60893 370 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 GUCY1A3Q02108 690 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 STRN3Q13033 797 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 SF1Q15637 639 aaKnown RBP6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 BRDTQ58F21 947 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 DUSP27Q5VZP5 1158 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 RCSD1Q6JBY9 416 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 ZCCHC8Q6NZY4 707 aaKnown RBP6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 CRTC3Q6UUV7 619 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 FGD2Q7Z6J4 655 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 METTL22Q9BUU2 404 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 MKNK2Q9HBH9 465 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 CHPF2Q9P2E5 772 aa6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 G3BP2Q9UN86 482 aaKnown RBP6.43□□□□□ -1.38
HMGB3P18-201ENST00000406327 ZEB2O60315 1214 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 KPNA6O60684 536 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 THBDP07204 575 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 SCNN1BP51168 640 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 GUCY2FP51841 1108 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 EPHB1P54762 984 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 TNK2Q07912 1038 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 CPSF6Q16630 551 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 PRSS53Q2L4Q9 553 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 PKN3Q6P5Z2 889 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 SPATS2Q86XZ4 545 aaKnown RBP6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 NPLOC4Q8TAT6 608 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 WDR66Q8TBY9 1149 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 SCLYQ96I15 445 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 WNK4Q96J92 1243 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 ORAI3Q9BRQ5 295 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms