RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 CCT8L1PA6NM43 557 aa15.46■□□□□ 0.07
DUSP28-202ENST00000405954 QPCTQ16769 361 aa15.46■□□□□ 0.07
DUSP28-202ENST00000405954 DDX27Q96GQ7 796 aaKnown RBP15.46■□□□□ 0.07
DUSP28-202ENST00000405954 ANAPC4Q9UJX5 808 aa15.46■□□□□ 0.07
DUSP28-202ENST00000405954 ATP5J2-PTCD1G3V325 749 aa15.46■□□□□ 0.07
DUSP28-202ENST00000405954 PTCD1O75127 700 aaKnown RBP15.46■□□□□ 0.07
DUSP28-202ENST00000405954 STOX1Q6ZVD7 989 aa15.46■□□□□ 0.07
DUSP28-202ENST00000405954 ZNF365Q70YC5 407 aa15.46■□□□□ 0.07
DUSP28-202ENST00000405954 XAGE2Q96GT9 111 aa15.46■□□□□ 0.07
DUSP28-202ENST00000405954 TANGO6Q9C0B7 1094 aa15.46■□□□□ 0.07
DUSP28-202ENST00000405954 RPS6KL1Q9Y6S9 549 aa15.46■□□□□ 0.07
DUSP28-202ENST00000405954 ATXN2Q99700 1313 aaKnown RBP15.46■□□□□ 0.06
DUSP28-202ENST00000405954 TTC26A0AVF1 554 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 PPP4R3AQ6IN85 833 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 THEMISQ8N1K5 641 aaPredicted RBP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 FNBP4Q8N3X1 1017 aaPredicted RBP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 NAF1Q96HR8 494 aaKnown RBP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 LBHD1Q9BQE6 289 aaPredicted RBP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 NUTM2BA6NNL0 878 aaPredicted RBP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 NUTM2EB1AL46 878 aaPredicted RBP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 FAM153BP0C7A2 387 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 FDPSP14324 419 aaKnown RBP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 BMP6P22004 513 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 PPP2R2AP63151 447 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 TNNC1P63316 161 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 FAM153CQ494X1 144 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 ANKRD20A2Q5SQ80 823 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 ANKRD20A1Q5TYW2 823 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 ANKRD20A3Q5VUR7 823 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 UHMK1Q8TAS1 419 aaKnown RBP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 MDM1Q8TC05 714 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 DDX17Q92841 729 aaKnown RBP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 DDX23Q9BUQ8 820 aaKnown RBP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 MLXIPQ9HAP2 919 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 FAM153AQ9UHL3 310 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 GOLGA8AA7E2F4 631 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 SMNDC1O75940 238 aaKnown RBP eCLIP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 TCERG1LQ5VWI1 586 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 RESP18Q5W5W9 173 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 WDR66Q8TBY9 1149 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.45■□□□□ 0.06
DUSP28-202ENST00000405954 SCOCQ9UIL1 159 aa15.45■□□□□ 0.06
DUSP28-202ENST00000405954 ZNF233A6NK53 670 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 PPP6R2O75170 966 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 KRT26Q7Z3Y9 468 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 CHMP6Q96FZ7 201 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 MS4A14Q96JA4 679 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 CCDC85AQ96PX6 553 aaPredicted RBP15.44■□□□□ 0.06
DUSP28-202ENST00000405954 LACRTQ9GZZ8 138 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 ALDH8A1Q9H2A2 487 aaPredicted RBP15.44■□□□□ 0.06
DUSP28-202ENST00000405954 TAF1DQ9H5J8 278 aaPredicted RBP15.44■□□□□ 0.06
DUSP28-202ENST00000405954 DDX21Q9NR30 783 aaKnown RBP eCLIP15.44■□□□□ 0.06
DUSP28-202ENST00000405954 SNRKQ9NRH2 765 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 AKAP12Q02952 1782 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 CCDC160A6NGH7 325 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 CCND1P24385 295 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 MAGEA1P43355 309 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 RAD23BP54727 409 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 MORC3Q14149 939 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 SPRED3Q2MJR0 410 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 SOGA3Q5TF21 947 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 TLDC1Q6P9B6 456 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 SPICE1Q8N0Z3 855 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 TRIML1Q8N9V2 468 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 MAGEC3Q8TD91 643 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 RAPGEF5Q92565 580 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 MYL10Q9BUA6 226 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 MMRN2Q9H8L6 949 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 SASH1O94885 1247 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 ZNF18P17022 549 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 DESP17661 470 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 PAK1Q13153 545 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 EPHA10Q5JZY3 1008 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 VSIG1Q86XK7 387 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 P3H4Q92791 437 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 ECT2Q9H8V3 914 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 RBM12Q9NTZ6 932 aaKnown RBP15.44■□□□□ 0.06
DUSP28-202ENST00000405954 KCNJ14Q9UNX9 436 aa15.44■□□□□ 0.06
DUSP28-202ENST00000405954 ZNF330Q9Y3S2 320 aaPredicted RBP15.44■□□□□ 0.06
DUSP28-202ENST00000405954 IGF2BP3O00425 579 aaKnown RBP eCLIP15.43■□□□□ 0.06
DUSP28-202ENST00000405954 ZNF213O14771 459 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 TPD52L2O43399 206 aaKnown RBP15.43■□□□□ 0.06
DUSP28-202ENST00000405954 ERICH1Q86X53 443 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 C2CD5Q86YS7 1000 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 KSR1Q8IVT5 923 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 SNX12Q9UMY4 172 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 DPPA5A6NC42 116 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 FESP07332 822 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 MMEP08473 750 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 DYNC1I2Q13409 638 aaKnown RBP15.43■□□□□ 0.06
DUSP28-202ENST00000405954 XRCC4Q13426 336 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 FAM47EQ6ZV65 393 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 TRIM42Q8IWZ5 723 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 NCOA7Q8NI08 942 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 NELFBQ8WX92 580 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 GORASP1Q9BQQ3 440 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 TRIM7Q9C029 511 aa15.43■□□□□ 0.06
DUSP28-202ENST00000405954 NHEJ1Q9H9Q4 299 aaPredicted RBP15.43■□□□□ 0.06
DUSP28-202ENST00000405954 CFAP73A6NFT4 308 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms