RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 M0R2N6 131 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 CCNT1O60563 726 aaKnown RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 CELF2O95319 508 aaKnown RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 CFBP00751 764 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 PTGDRQ13258 359 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 PTPAQ15257 358 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 CAMK4Q16566 473 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 PPP1R18Q6NYC8 613 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 CCDC73Q6ZRK6 1079 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 FCHSD1Q86WN1 690 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 LDHDQ86WU2 507 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 RAVER2Q9HCJ3 691 aaKnown RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 DACT1Q9NYF0 836 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 CCPG1Q9ULG6 757 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 NR1I2O75469 434 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 PLS1Q14651 629 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 ADALQ6DHV7 355 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 ERO1BQ86YB8 467 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 KRI1Q8N9T8 703 aaKnown RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 RBM46Q8TBY0 533 aaKnown RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 SYAP1Q96A49 352 aaPredicted RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 OPTNQ96CV9 577 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 ATG4CQ96DT6 458 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 SLC10A4Q96EP9 437 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 WNK4Q96J92 1243 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 RANBP17Q9H2T7 1088 aaKnown RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 PPP1R9AQ9ULJ8 1098 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 SCN4AP35499 1836 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 ATAD5Q96QE3 1844 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 SYCE3A1L190 88 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 SPDYE3A6NKU9 549 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 PLA2G6O60733 806 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 ZBED4O75132 1171 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 ALAS1P13196 640 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 TRAPPC10P48553 1259 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 GRIN1Q05586 938 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 PPATQ06203 517 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 ZSCAN23Q3MJ62 389 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 TREML2Q5T2D2 321 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 NEK8Q86SG6 692 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 FAM177A1Q8N128 213 aaPredicted RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 MRPS27Q92552 414 aaKnown RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 TBC1D5Q92609 795 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 UIMC1Q96RL1 719 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 PANK2Q9BZ23 570 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 GOLPH3LQ9H4A5 285 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 SMCHD1A6NHR9 2005 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 VWA3AA6NCI4 1184 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 VWA5AO00534 786 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 MEIS2O14770 477 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 PPP6R2O75170 966 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 GSE1Q14687 1217 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 COG2Q14746 738 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 AXDND1Q5T1B0 1012 aaPredicted RBP4.22□□□□□ -1.73
RTN4-208ENST00000404909 GLT8D2Q9H1C3 349 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 SLC38A10Q9HBR0 1119 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 GBA2Q9HCG7 927 aaPredicted RBP4.22□□□□□ -1.73
RTN4-208ENST00000404909 MRPL11Q9Y3B7 192 aaKnown RBP4.22□□□□□ -1.73
RTN4-208ENST00000404909 SPDYE5A6NIY4 337 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 PEX10O60683 326 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 KINO60870 393 aaKnown RBP4.22□□□□□ -1.73
RTN4-208ENST00000404909 BMP15O95972 392 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 ICAM1P05362 532 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 NDUFA8P51970 172 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 TRAF1Q13077 416 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 CCDC183Q5T5S1 534 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 C2orf69Q8N8R5 385 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 C12orf42Q96LP6 360 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 ANO3Q9BYT9 981 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 CSRNP2Q9H175 543 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 DOCK1Q14185 1865 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 ZNF536O15090 1300 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 WDR90Q96KV7 1748 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 GCOM1H8Y6P7 765 aaPredicted RBP4.22□□□□□ -1.73
RTN4-208ENST00000404909 NFIBO00712 420 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 OPLAHO14841 1288 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 MARCH6O60337 910 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 CUTAO60888 179 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 TDP2O95551 362 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 POLR2MP0CAP2 368 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 PFKFB1P16118 471 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 PTPREP23469 700 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 DSG3P32926 999 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 UBXN2AP68543 259 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 IRX3P78415 501 aaPredicted RBP4.22□□□□□ -1.73
RTN4-208ENST00000404909 FAM160A1Q05DH4 1040 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 ZRSR1Q15695 479 aaKnown RBP4.22□□□□□ -1.73
RTN4-208ENST00000404909 MAP3K11Q16584 847 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 SHC4Q6S5L8 630 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 CATSPERGQ6ZRH7 1159 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 CKAP2LQ8IYA6 745 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 PDILTQ8N807 584 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 NUP62CLQ9H1M0 184 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 TMEM60Q9H2L4 133 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 HOXC10Q9NYD6 342 aa4.22□□□□□ -1.73
RTN4-208ENST00000404909 FBXO2Q9UK22 296 aaPredicted RBP4.22□□□□□ -1.73
RTN4-208ENST00000404909 SRPRBQ9Y5M8 271 aaKnown RBP4.22□□□□□ -1.73
RTN4-208ENST00000404909 A0A1W2PQ27 194 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 A0A1W2PQ64 194 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms