RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 KLRC4O43908 158 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 STIM1Q13586 685 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 TBC1D9BQ66K14 1250 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 USP17L2Q6R6M4 530 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 TRAPPC11Q7Z392 1133 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 HNRNPLLQ8WVV9 542 aaKnown RBP13.4□□□□□ -0.26
RBM39-206ENST00000403542 DUSP9Q99956 384 aaKnown RBP13.4□□□□□ -0.26
RBM39-206ENST00000403542 UBA5Q9GZZ9 404 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
RBM39-206ENST00000403542 ITGB4P16144 1822 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 RASSF10A6NK89 507 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 POTEB2H3BUK9 544 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 TULP2O00295 520 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 TXKP42681 527 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 CABP7Q86V35 215 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 MARCH10Q8NA82 808 aaPredicted RBP13.4□□□□□ -0.26
RBM39-206ENST00000403542 MMRN2Q9H8L6 949 aa13.4□□□□□ -0.26
RBM39-206ENST00000403542 BIN2Q9UBW5 565 aaPredicted RBP13.4□□□□□ -0.26
RBM39-206ENST00000403542 NAPAP54920 295 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
RBM39-206ENST00000403542 LRRC41Q15345 812 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 TTI2Q6NXR4 508 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 C2CD5Q86YS7 1000 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 GOLGA5Q8TBA6 731 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 EXOC1Q9NV70 894 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 ZNHIT6Q9NWK9 470 aaKnown RBP13.39□□□□□ -0.27
RBM39-206ENST00000403542 NCK2O43639 380 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 CALML3P27482 149 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 RPS8P62241 208 aaKnown RBP13.39□□□□□ -0.27
RBM39-206ENST00000403542 FAM182BQ5T319 152 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 GLIS3Q8NEA6 775 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 ZNF507Q8TCN5 953 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 TMEM260Q9NX78 707 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 MAD2L2Q9UI95 211 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 CAPN11Q9UMQ6 739 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 DUOX1Q9NRD9 1551 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 TIAM2Q8IVF5 1701 aa13.39□□□□□ -0.27
RBM39-206ENST00000403542 ZNF263O14978 683 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 KRT86O43790 486 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 MOCS3O95396 460 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 GGCXP38435 758 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 USP14P54578 494 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 NAP1L1P55209 391 aaKnown RBP13.38□□□□□ -0.27
RBM39-206ENST00000403542 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
RBM39-206ENST00000403542 TRIM14Q14142 442 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 CT47A1Q5JQC4 288 aaPredicted RBP13.38□□□□□ -0.27
RBM39-206ENST00000403542 TMC4Q7Z404 712 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 COG1Q8WTW3 980 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 CCDC42Q96M95 316 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 DNAJC7Q99615 494 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 RRP15Q9Y3B9 282 aaKnown RBP13.38□□□□□ -0.27
RBM39-206ENST00000403542 CAPN6Q9Y6Q1 641 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 PTPROQ16827 1216 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 ZNF444Q8N0Y2 327 aaPredicted RBP13.38□□□□□ -0.27
RBM39-206ENST00000403542 EHD4Q9H223 541 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 DEF6Q9H4E7 631 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 TCP11L1Q9NUJ3 509 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 KLRF2D3W0D1 207 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 ORC4O43929 436 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 FECHP22830 423 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 RRP36Q96EU6 259 aaKnown RBP13.38□□□□□ -0.27
RBM39-206ENST00000403542 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 ZNF652Q9Y2D9 606 aa13.38□□□□□ -0.27
RBM39-206ENST00000403542 PSMD14O00487 310 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 BUB1O43683 1085 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 SYF2O95926 243 aaKnown RBP13.37□□□□□ -0.27
RBM39-206ENST00000403542 APBA1Q02410 837 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 ARID5AQ03989 594 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 ARL6IP4Q66PJ3 421 aaKnown RBP13.37□□□□□ -0.27
RBM39-206ENST00000403542 NFRKBQ6P4R8 1299 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 FBXO33Q7Z6M2 555 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
RBM39-206ENST00000403542 POTEDQ86YR6 584 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 CLEC10AQ8IUN9 316 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 GOLGA6L1Q8N7Z2 621 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 GIMAP8Q8ND71 665 aaPredicted RBP13.37□□□□□ -0.27
RBM39-206ENST00000403542 P2RX5Q93086 422 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 TMEM47Q9BQJ4 181 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 TRIM9Q9C026 710 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 CWC15Q9P013 229 aaKnown RBP13.37□□□□□ -0.27
RBM39-206ENST00000403542 TBC1D7Q9P0N9 293 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 PDS5AQ29RF7 1337 aaKnown RBP13.37□□□□□ -0.27
RBM39-206ENST00000403542 CYLC1P35663 651 aaPredicted RBP13.37□□□□□ -0.27
RBM39-206ENST00000403542 DNM2P50570 870 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 KIF5AQ12840 1032 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 LINC00116Q8NCU8 138 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 CRACR2AQ9BSW2 395 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 GBP3Q9H0R5 595 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 MYO1AQ9UBC5 1043 aa13.37□□□□□ -0.27
RBM39-206ENST00000403542 ARPP21Q9UBL0 812 aaPredicted RBP13.37□□□□□ -0.27
RBM39-206ENST00000403542 FRMPD2Q68DX3 1309 aaPredicted RBP13.37□□□□□ -0.27
RBM39-206ENST00000403542 SMCO2A6NFE2 343 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 STXBP3O00186 592 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 SSBP05455 408 aaKnown RBP eCLIP13.36□□□□□ -0.27
RBM39-206ENST00000403542 FGRP09769 529 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 SRGNP10124 158 aa13.36□□□□□ -0.27
RBM39-206ENST00000403542 EEF1GP26641 437 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms