RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 SPTLC2O15270 562 aa18■□□□□ 0.47
PDGFA-203ENST00000402802 AKR1B1P15121 316 aa18■□□□□ 0.47
PDGFA-203ENST00000402802 EIF6P56537 245 aaKnown RBP18■□□□□ 0.47
PDGFA-203ENST00000402802 GABPAQ06546 454 aa18■□□□□ 0.47
PDGFA-203ENST00000402802 E2F4Q16254 413 aa18■□□□□ 0.47
PDGFA-203ENST00000402802 KRT40Q6A162 431 aa18■□□□□ 0.47
PDGFA-203ENST00000402802 CCDC102AQ96A19 550 aa18■□□□□ 0.47
PDGFA-203ENST00000402802 ZSWIM4Q9H7M6 989 aa18■□□□□ 0.47
PDGFA-203ENST00000402802 ZNRF3Q9ULT6 936 aa18■□□□□ 0.47
PDGFA-203ENST00000402802 KCNJ14Q9UNX9 436 aa18■□□□□ 0.47
PDGFA-203ENST00000402802 VIL1P09327 827 aaKnown RBP17.99■□□□□ 0.47
PDGFA-203ENST00000402802 CMA1P23946 247 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 PRELPP51888 382 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 CXCL9Q07325 125 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 GRIPAP1Q4V328 841 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 ZSCAN29Q8IWY8 852 aaPredicted RBP17.99■□□□□ 0.47
PDGFA-203ENST00000402802 TC2NQ8N9U0 490 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 PNMA1Q8ND90 353 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 CLIC4Q9Y696 253 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 BRCA1P38398 1863 aaKnown RBP17.99■□□□□ 0.47
PDGFA-203ENST00000402802 CT47A1Q5JQC4 288 aaPredicted RBP17.99■□□□□ 0.47
PDGFA-203ENST00000402802 STAG2Q8N3U4 1231 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 SRBD1Q8N5C6 995 aaKnown RBP17.99■□□□□ 0.47
PDGFA-203ENST00000402802 SHISA4Q96DD7 197 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 CEP95Q96GE4 821 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 TMEM47Q9BQJ4 181 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.99■□□□□ 0.47
PDGFA-203ENST00000402802 FAM204AQ9H8W3 233 aa17.99■□□□□ 0.47
PDGFA-203ENST00000402802 SCAF8Q9UPN6 1271 aaKnown RBP17.99■□□□□ 0.47
PDGFA-203ENST00000402802 FUT2Q10981 343 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 SOGA3Q5TF21 947 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 GMLQ99445 158 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 DNAJC18Q9H819 358 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 INTS13Q9NVM9 706 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 DONSONQ9NYP3 566 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 PUF60Q9UHX1 559 aaKnown RBP17.98■□□□□ 0.47
PDGFA-203ENST00000402802 SERPINB13Q9UIV8 391 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 CD2APQ9Y5K6 639 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 ANKRD65E5RJM6 399 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 DDAH1O94760 285 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 CCDC175P0C221 793 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 PFKFB1P16118 471 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 HDLBPQ00341 1268 aaKnown RBP17.98■□□□□ 0.47
PDGFA-203ENST00000402802 KIF23Q02241 960 aaPredicted RBP17.98■□□□□ 0.47
PDGFA-203ENST00000402802 MICALL1Q8N3F8 863 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 MRIQ9BWK5 157 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 CPVLQ9H3G5 476 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 VIPAS39Q9H9C1 493 aa17.98■□□□□ 0.47
PDGFA-203ENST00000402802 V9GY48 417 aaPredicted RBP17.98■□□□□ 0.47
PDGFA-203ENST00000402802 CCDC196A0A1B0GTZ2 297 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 TCP10L2B9ZVM9 353 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 GOLGA8HP0CJ92 632 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
PDGFA-203ENST00000402802 SHMT1P34896 483 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 KARSQ15046 597 aaKnown RBP17.97■□□□□ 0.47
PDGFA-203ENST00000402802 TMTC3Q6ZXV5 915 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 DGKHQ86XP1 1220 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 TRIM22Q8IYM9 498 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 PDILTQ8N807 584 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 NEDD1Q8NHV4 660 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 CTCFLQ8NI51 663 aaPredicted RBP17.97■□□□□ 0.47
PDGFA-203ENST00000402802 SUGCTQ9HAC7 445 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 ZNF287Q9HBT7 754 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 KIF1CO43896 1103 aaKnown RBP17.97■□□□□ 0.47
PDGFA-203ENST00000402802 AARSP49588 968 aaKnown RBP eCLIP17.97■□□□□ 0.47
PDGFA-203ENST00000402802 SPECC1LQ69YQ0 1117 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 ISM2Q6H9L7 571 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 RPAINQ86UA6 219 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 AFAP1L1Q8TED9 768 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 MRPL44Q9H9J2 332 aaKnown RBP17.97■□□□□ 0.47
PDGFA-203ENST00000402802 FANCLQ9NW38 375 aa17.97■□□□□ 0.47
PDGFA-203ENST00000402802 RCAN1P53805 252 aa17.96■□□□□ 0.47
PDGFA-203ENST00000402802 VSNL1P62760 191 aa17.96■□□□□ 0.47
PDGFA-203ENST00000402802 PKN1Q16512 942 aa17.96■□□□□ 0.47
PDGFA-203ENST00000402802 WWC2Q6AWC2 1192 aa17.96■□□□□ 0.47
PDGFA-203ENST00000402802 ANKRD20A12PQ8NF67 263 aa17.96■□□□□ 0.47
PDGFA-203ENST00000402802 VPS54Q9P1Q0 977 aa17.96■□□□□ 0.47
PDGFA-203ENST00000402802 STK36Q9NRP7 1315 aa17.96■□□□□ 0.47
PDGFA-203ENST00000402802 MPHOSPH10O00566 681 aaKnown RBP17.95■□□□□ 0.46
PDGFA-203ENST00000402802 HLA-DOAP06340 250 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 PRR29P0C7W0 189 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 MAP2K2P36507 400 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 BRAPQ7Z569 592 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 JDP2Q8WYK2 163 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 IDI2Q9BXS1 227 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 TCP11L1Q9NUJ3 509 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 CNTNAP5Q8WYK1 1306 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 FER1L6Q2WGJ9 1857 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 SPDYE2BA6NHP3 402 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 KIF5CO60282 957 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 PHACTR2O75167 634 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 ERLIN2O94905 339 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 SPDYE6P0CI01 402 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 USP8P40818 1118 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 LRRC47Q8N1G4 583 aaKnown RBP17.95■□□□□ 0.46
PDGFA-203ENST00000402802 DESI2Q9BSY9 194 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 PSME4Q14997 1843 aa17.95■□□□□ 0.46
PDGFA-203ENST00000402802 RNF40O75150 1001 aa17.94■□□□□ 0.46
PDGFA-203ENST00000402802 DEXIO95424 95 aa17.94■□□□□ 0.46
PDGFA-203ENST00000402802 CALM1P0DP23 149 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms