RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 KAT2BQ92831 832 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 CCDC194A0A1B0GVG4 234 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 N4BP3O15049 544 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 GPSM2P81274 684 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 CLEC10AQ8IUN9 316 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 LAMB2P55268 1798 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 SLURP2P0DP57 97 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 STAT6P42226 847 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 PMS1P54277 932 aaKnown RBP15.78■□□□□ 0.12
ATG3-202ENST00000402314 CNBD1Q8NA66 436 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 HNRNPLLQ8WVV9 542 aaKnown RBP15.78■□□□□ 0.12
ATG3-202ENST00000402314 NELFBQ8WX92 580 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 MFAP3LO75121 409 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 PRCPP42785 496 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 UBA5Q9GZZ9 404 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 PCDHA6Q9UN73 950 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 PCDHA4Q9UN74 947 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 PCDHA8Q9Y5H6 950 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 COL5A3P25940 1745 aaPredicted RBP15.78■□□□□ 0.12
ATG3-202ENST00000402314 MYO1BO43795 1136 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 UFL1O94874 794 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 BMP15O95972 392 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 RASA1P20936 1047 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 BTDP43251 543 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 NAALADL2Q58DX5 795 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 TRAPPC3LQ5T215 181 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 CCDC148Q8NFR7 591 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 CAGE1Q8TC20 777 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 LRRC4BQ9NT99 713 aa15.78■□□□□ 0.12
ATG3-202ENST00000402314 RPN1P04843 607 aaKnown RBP15.77■□□□□ 0.12
ATG3-202ENST00000402314 ATP1A1P05023 1023 aaKnown RBP15.77■□□□□ 0.12
ATG3-202ENST00000402314 EIF6P56537 245 aaKnown RBP15.77■□□□□ 0.12
ATG3-202ENST00000402314 KLRF2D3W0D1 207 aa15.77■□□□□ 0.11
ATG3-202ENST00000402314 F8W031 263 aaPredicted RBP15.77■□□□□ 0.11
ATG3-202ENST00000402314 PPFIA4O75335 1185 aa15.77■□□□□ 0.11
ATG3-202ENST00000402314 KRT9P35527 623 aa15.77■□□□□ 0.11
ATG3-202ENST00000402314 GRAPQ13588 217 aa15.77■□□□□ 0.11
ATG3-202ENST00000402314 SPTY2D1Q68D10 685 aaPredicted RBP15.77■□□□□ 0.11
ATG3-202ENST00000402314 TADA2BQ86TJ2 420 aa15.77■□□□□ 0.11
ATG3-202ENST00000402314 GRAPLQ8TC17 118 aaPredicted RBP15.77■□□□□ 0.11
ATG3-202ENST00000402314 UIMC1Q96RL1 719 aa15.77■□□□□ 0.11
ATG3-202ENST00000402314 PBX1P40424 430 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 STIM1Q13586 685 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 GRM4Q14833 912 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 VPS72Q15906 364 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 RC3H1Q5TC82 1133 aaKnown RBP15.76■□□□□ 0.11
ATG3-202ENST00000402314 DGKHQ86XP1 1220 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 WDR66Q8TBY9 1149 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 PANX2Q96RD6 677 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 CRACR2AQ9BSW2 395 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 GTPBP6O43824 516 aaPredicted RBP15.76■□□□□ 0.11
ATG3-202ENST00000402314 PAK1Q13153 545 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 LETM2Q2VYF4 491 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 HPS3Q969F9 1004 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 CASZ1Q86V15 1759 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 PRR5LQ6MZQ0 368 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 DTHD1Q6ZMT9 781 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 SMARCAL1Q9NZC9 954 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 USP21Q9UK80 565 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 DUSP10Q9Y6W6 482 aa15.76■□□□□ 0.11
ATG3-202ENST00000402314 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.75■□□□□ 0.11
ATG3-202ENST00000402314 POTEB2H3BUK9 544 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 STXBP3O00186 592 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 NKRFO15226 690 aaKnown RBP eCLIP15.75■□□□□ 0.11
ATG3-202ENST00000402314 ERLIN2O94905 339 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 CALML3P27482 149 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 ARHGAP25P42331 645 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 EZH2Q15910 746 aaKnown RBP15.75■□□□□ 0.11
ATG3-202ENST00000402314 TEX11Q8IYF3 940 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 BCAS4Q8TDM0 211 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 EYA3Q99504 573 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 RTFDC1Q9BY42 306 aaPredicted RBP15.75■□□□□ 0.11
ATG3-202ENST00000402314 HPCAL4Q9UM19 191 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 BAG3O95817 575 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 CDK8P49336 464 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 COPB1P53618 953 aaKnown RBP15.75■□□□□ 0.11
ATG3-202ENST00000402314 SLC7A5Q01650 507 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 C2orf54Q08AI8 447 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 PICALMQ13492 652 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 FILIP1LQ4L180 1135 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 SECISBP2LQ93073 1101 aaKnown RBP15.75■□□□□ 0.11
ATG3-202ENST00000402314 CD209Q9NNX6 404 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 DISC1Q9NRI5 854 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 MYH8P13535 1937 aa15.75■□□□□ 0.11
ATG3-202ENST00000402314 FRMPD2Q68DX3 1309 aaPredicted RBP15.74■□□□□ 0.11
ATG3-202ENST00000402314 MACROD2A1Z1Q3 448 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 KCNJ18B7U540 433 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 UBA7P41226 1012 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 TRAPPC10P48553 1259 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 NAPAP54920 295 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 KCNJ12Q14500 433 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 KCTD16Q68DU8 428 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 IRF2BP1Q8IU81 584 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
ATG3-202ENST00000402314 RRP36Q96EU6 259 aaKnown RBP15.74■□□□□ 0.11
ATG3-202ENST00000402314 ACBD3Q9H3P7 528 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 TMEM260Q9NX78 707 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 TNRC6CQ9HCJ0 1690 aaKnown RBP15.74■□□□□ 0.11
ATG3-202ENST00000402314 M0R2N6 131 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 RIMBP2O15034 1052 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms